DRSC/TRiP Functional Genomics Resources

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Protein Alignment AcCoAS and Acsm4

DIOPT Version :9

Sequence 1:NP_001014599.2 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_859046.1 Gene:Acsm4 / 353317 RGDID:727928 Length:580 Species:Rattus norvegicus


Alignment Length:656 Identity:190/656 - (28%)
Similarity:269/656 - (41%) Gaps:149/656 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LDNPAEFWSRVAKQFH-----WETPADQDKF---------LKYNFNISKGPI---SIKWMEG--- 78
            |..||      .:.||     | .|...|.|         |..|||.:...:   |:|...|   
  Rat    15 LAKPA------GRHFHRDPQLW-APLTLDDFEAINRCEKPLPKNFNFAADVLDQWSLKEKSGERP 72

  Fly    79 ASTNLCYNLLDRNVRNGLGDQIAYYWEGNHPDDYSRGLTYRKLLEEVCRFANVL-KDHGIRKGDR 142
            |:..|.:       .||.||::.  |........||            :.|||| |..|:::|||
  Rat    73 ANPALWW-------VNGKGDEVK--WSFQELGSLSR------------KAANVLTKPCGLQRGDR 116

  Fly   143 VSIYMPMILELPIAMLACARIGAVHSIVFAGFSPDSLAERMFDCKAKLLITADGAWRGEKPLYLK 207
            |::.:|.|.|..:..:||.|.|.|       |.|.::.          |...|..:|      |:
  Rat   117 VAVILPRIPEWWLINVACMRTGLV-------FMPGTIQ----------LTRKDILYR------LQ 158

  Fly   208 ALCDTALEKVEEMGHSVEKCIVVSHLKRVTPCQPDHVEEEIP------------WTDDRDYW--W 258
            |              |..||||.|  :.|.|. .|.:..|.|            |    |.|  :
  Rat   159 A--------------SKAKCIVAS--EEVAPA-VDSIASECPNLKTKLLVSPHRW----DGWLSF 202

  Fly   259 HEEME--DKEPACYPEWMDAEDPLFMLYTSGSTGKPKGVLHTTAGYLLYAATTFKIVFDYKPGDI 321
            .|.::  .:|..|..  ..:::|:.:.:|||:||.||...|:.:...:..|...:...|....||
  Rat   203 QELLQSASEEHNCVQ--TGSQEPMAIYFTSGTTGSPKMAQHSQSSLGIGYALCGRYWLDLTSSDI 265

  Fly   322 YWCTGDVGWITGHTYVVYGPLANGATSVIFEGTPFFPGNDRYWSVIDKYKVTQFYTAPTAIRAL- 385
            .|...|.|||......|:.....||...:.....|  ..|.:...:..|.:|...:|||..|.| 
  Rat   266 MWNMSDTGWIKAAIGSVFSTWLRGACVFVHRMAQF--NTDTFLDTLTSYPITTLCSAPTVYRMLV 328

  Fly   386 ---MKFGEGPVLKHNLSGLKVLGSVGEPINPEAWLWYYKYIGKEQCSIVDTFWQTETGGHVITPL 447
               :|..:...|:|.|:|       |||:|||....:....|.|   :.:.:.|||.|  :|...
  Rat   329 QQDLKRYQFKRLRHCLTG-------GEPLNPEVLEQWKAQTGLE---LYEGYGQTEVG--IICAN 381

  Fly   448 PGATPMKPGSASFPFFGVKP---TLLDECG--IEIKGEGEGYLVFSQPWPGMMRTLY-NNHERFE 506
            .....:||||..   .||.|   .::||.|  :....|||..|......|....:.| :|.|:.:
  Rat   382 RKGEEIKPGSMG---KGVVPYDVQIIDEHGNILPSGKEGEIALRLGSDRPFCFFSEYVDNPEKTD 443

  Fly   507 DTYFSKFPGYYCTGDGARRDADGYLWITGRVDDMLNVSGHLMSTAEVESVLTEHPRVAESAVVSR 571
            .|....|   |.|||....|.|||||..||.||::..||:.:...||||.|.|||.|.||||||.
  Rat   444 ATIRRNF---YITGDRGVMDDDGYLWFVGRADDVIISSGYRIGPFEVESALIEHPAVVESAVVSS 505

  Fly   572 PHPVKGECLYCFIT-----PNENEVFDQKLISDLKKMVRERIGPFAMPDVIQNAPGLPKTRSGKI 631
            |.|::||.:..||.     .:.|.   :||.::|:..|:....|:..|..::....||||.:|||
  Rat   506 PDPIRGEVVKAFIVLAAPFKSSNR---EKLTAELQDHVKNSTAPYKYPRKVEFVQELPKTITGKI 567

  Fly   632 MRRVLR 637
            .|.|||
  Rat   568 KRNVLR 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_001014599.2 PRK00174 7..665 CDD:234677 190/656 (29%)
ACS 30..654 CDD:213313 190/656 (29%)
Acsm4NP_859046.1 MACS_euk 48..577 CDD:341251 181/616 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0365
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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