DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AcCoAS and Acsm5

DIOPT Version :9

Sequence 1:NP_001014599.2 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_006507967.1 Gene:Acsm5 / 272428 MGIID:2444086 Length:591 Species:Mus musculus


Alignment Length:680 Identity:169/680 - (24%)
Similarity:272/680 - (40%) Gaps:186/680 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PNPAISQNAYISSFE----------EYQKFYQESLDNPAEFWSRVAKQFH-------WETPADQD 57
            |.|.|.:  .::::|          ||..|..:.||    .||::.|..|       |       
Mouse    40 PPPPIPE--VVATWEAISLGRQPVPEYFNFAHDVLD----VWSQLEKTGHRPPNPAFW------- 91

  Fly    58 KFLKYNFNISKGPISIKWMEGASTNLCYNLLDRNVRNGLGDQIAYYWEGNHPDDYSRGLTYRKLL 122
                             |:.|:.|.:                   .|            |:.:|.
Mouse    92 -----------------WVNGSGTEV-------------------KW------------TFEELG 108

  Fly   123 EEVCRFANVLKD-HGIRKGDRVSIYMPMILELPIAMLACARIGAVHSIVFAGFSPDSLAERMFDC 186
            ::..:.||||:. .|::.|||:.:.:|.:.:..:..:||.|.|.|.....:..:...|..|:...
Mouse   109 KQSRKAANVLEGVCGLQPGDRMMLVLPRLPDWWLISVACMRTGVVMIPGVSQLTAKDLKYRLQAA 173

  Fly   187 KAKLLITADGAWRGEKPLYLKALCDTALEKVEEMGHSVEKCIVVSHLKRVTPCQPDHVEEEIPWT 251
            :||.::|:|            ||. ..::.:.....|::..::||...|     |.       |.
Mouse   174 RAKSIVTSD------------ALA-PQVDAISADCPSLQTKLLVSDTSR-----PG-------WI 213

  Fly   252 DDRDYWWHEEMEDKEPACYPEW----MDAEDPLFMLYTSGSTGKPKGVLHTTAGYLLYAATTFKI 312
            :.|:..         .|..||.    ..:.|.:.:.:|||:||.||.|.|:.:.|.|....:.:.
Mouse   214 NFRELL---------RAASPEHNCVRTRSGDSVAIYFTSGTTGAPKMVEHSQSSYGLGFVASGRR 269

  Fly   313 VFDYKPGDIYWCTGDVGWITGHTYVVYGPLANGATSVIFEGTPFFPGND--RYWSVIDKYKVTQF 375
            .......||:|.|.|.||:.. .:.::...:|||...:.|    .|..|  ...:.:.::.:|..
Mouse   270 WMALTESDIFWNTTDTGWVKA-AWTLFSAWSNGACIFVHE----LPRVDAKTILNTLCRFPITTL 329

  Fly   376 YTAPTAIRALM-------KFGEGPVLKHNLSGLKVLGSVGEPINPEAWLWYYKYIGKEQCSIVDT 433
            ...||..|.|:       ||   ..|:|.|:|       ||.:||:                |..
Mouse   330 CCVPTLFRLLVQEDLTRYKF---QCLRHCLTG-------GEALNPD----------------VRD 368

  Fly   434 FWQTETG-----GH------VITPLPGATPMKPGS---ASFPFFGVKPTLLDECGIEIKGEGEGY 484
            .|:::||     |:      ||......:.:|.||   ||.|:   ...::||.|..:....||.
Mouse   369 KWKSQTGLELHEGYGQSETVVICGNSRNSTIKSGSMGKASPPY---DVQIVDEEGNVLPPGKEGN 430

  Fly   485 LVF----SQPWPGMMRTLYNNH-ERFEDTYFSKFPGYYCTGDGARRDADGYLWITGRVDDMLNVS 544
            :..    ::|:     ..:|.: :..|.|..|:...:|.|||.|..|.|||.|..||.||::|.|
Mouse   431 IAVRIKPTRPF-----CFFNCYLDNPEKTAASEQGDFYITGDRAHMDEDGYFWFLGRNDDVINSS 490

  Fly   545 GHLMSTAEVESVLTEHPRVAESAVVSRPHPVKGECLYCFI--TPNENEVFDQKLISDLKKMVRER 607
            .:.:...||||.|.|||.|.||||||.|.|::||.:..||  :|.......:.|..:|::.|:..
Mouse   491 SYRIGPVEVESALAEHPAVLESAVVSSPDPIRGEVVKAFIVLSPAYASHDPEALTRELQEHVKTV 555

  Fly   608 IGPFAMPDVIQNAPGLPKTRSGKIMRRVLR 637
            ..|:..|..:.....||||.||||:|..||
Mouse   556 TAPYKYPRKVAFISELPKTVSGKILRSKLR 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_001014599.2 PRK00174 7..665 CDD:234677 169/680 (25%)
ACS 30..654 CDD:213313 162/650 (25%)
Acsm5XP_006507967.1 AFD_class_I 61..589 CDD:388389 165/657 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0365
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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