DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AcCoAS and Acsm3

DIOPT Version :9

Sequence 1:NP_001014599.2 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_006230168.1 Gene:Acsm3 / 24763 RGDID:62086 Length:581 Species:Rattus norvegicus


Alignment Length:648 Identity:182/648 - (28%)
Similarity:279/648 - (43%) Gaps:101/648 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SIYDPNPAISQNAYISSFEEYQKFYQESLDNPAEFWSRVAKQFHWETPADQDKFLKYNFNISKGP 70
            :|.||...:        :::|:....::..|    :..:...|..|.|       :| ||.:|..
  Rat    14 AIPDPRRIL--------YKDYRTAIPQNFSN----YESMKHDFKIEIP-------EY-FNFAKDV 58

  Fly    71 ISIKWMEGASTNLCYNLLDRNVRNGLGDQIAYYW-EGNHPDDYSRGLTYRKLLEEV----CRFAN 130
            :. :|.....|.       :.:.|.     |::| :||       |...|...||:    .:|||
  Rat    59 LD-QWTNTEKTG-------KRLSNP-----AFWWVDGN-------GKEVRWSFEELGSLSRKFAN 103

  Fly   131 VLKDH-GIRKGDRVSIYMPMILELPIAMLACARIGAVHSIVFAGFSPDSLAERMFDCKAKLLITA 194
            :|.:. .:::||||.:.:|.|.|..:|.:||.|.|.|........:...:..|:...|:|.:||.
  Rat   104 ILTEACSLQRGDRVMVILPKIPEWWLANVACLRTGTVLIPGTTQLTQKDILYRLQSSKSKCIITD 168

  Fly   195 DGAWRGEKPLYLKALCDTALEKVEEMGHSVEKCIVVSHLKRVTPCQPDHVEEEIPWTDDRDYWWH 259
            |         .|....|....|.|.: ||  |.||..|.:...    .:::|.:.:..|.    |
  Rat   169 D---------TLAPAVDIVAAKCENL-HS--KLIVSQHSREGW----GNLKEMMKYASDS----H 213

  Fly   260 EEMEDKEPACYPEWMDAEDPLFMLYTSGSTGKPKGVLHTTAGYLLYAATTFKIVFDYKPGDIYWC 324
            ..::.|.          .:.:.:.:|||:||.||.:.||.:.:.|..:...:...|....|:.|.
  Rat   214 TCVDTKH----------NELMAIYFTSGTTGPPKMIGHTHSSFGLGLSVNGRFWLDLIASDVMWN 268

  Fly   325 TGDVGWITGHTYVVYGPLANGATSVIFEGTPFFPGNDRYWSVIDKYKVTQFYTAPTAIRALMKFG 389
            |.|.||.......|:.|...|| .|.....|.|.... ....:.|:.:|.|.:||||.|.|::  
  Rat   269 TSDTGWAKSAWSSVFSPWTQGA-CVFAHYLPRFDSTS-ILQTLSKFPITVFCSAPTAYRMLIQ-- 329

  Fly   390 EGPVLKHNLSGLKVLGSVGEPINPEAWLWYYKYIGKEQCSIVDTFWQTETGGHVITPLPGATPMK 454
            ......:..:.||...|.|||||||....:.|..|.:   |.:.:.||||  .:|........:|
  Rat   330 NDITRSYKFNSLKHCVSAGEPINPEVMEQWKKKTGLD---IYEGYGQTET--VLICGNFKGMKIK 389

  Fly   455 PGSASFPFFGVKPTLLDECGIEIKGEGEGYLVF----SQPWPGMMRTLYNNHERFEDTYFSKFPG 515
            |||...|.......:|||.|..:....||.:..    .:|: |:.....:|..:...|....|  
  Rat   390 PGSMGKPSPAFNVEILDENGTILPPGQEGDIAVQVLPDRPF-GLFTHYVDNPSKTASTLRGNF-- 451

  Fly   516 YYCTGDGARRDADGYLWITGRVDDMLNVSGHLMSTAEVESVLTEHPRVAESAVVSRPHPVKGECL 580
             |.|||....|.|||.|...|.||::..||:.:...||||.|.|||.:|||||||.|.|::||.:
  Rat   452 -YITGDRGYMDEDGYFWFVARSDDVILSSGYRIGPFEVESALIEHPSIAESAVVSSPDPIRGEVV 515

  Fly   581 YCFITPN-ENEVFDQKLISDLKKMVRERI----GPFAMPDVIQNAPGLPKTRSGKIMRRVLRK 638
            ..||..| :.::.||:   .|||.::|.:    .|:..|..|:....||||.|||:.|..||:
  Rat   516 KAFIVLNPDYKLHDQE---QLKKEIQEHVKKTTAPYKYPRKIEFIEELPKTVSGKVKRNELRR 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_001014599.2 PRK00174 7..665 CDD:234677 182/647 (28%)
ACS 30..654 CDD:213313 178/624 (29%)
Acsm3XP_006230168.1 Acs 45..575 CDD:223442 175/603 (29%)
AFD_class_I 48..578 CDD:302604 175/602 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0365
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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