DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AcCoAS and Acsm2

DIOPT Version :9

Sequence 1:NP_001014599.2 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_653349.1 Gene:Acsm2 / 246263 RGDID:708383 Length:572 Species:Rattus norvegicus


Alignment Length:628 Identity:150/628 - (23%)
Similarity:236/628 - (37%) Gaps:139/628 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 HWETPADQDKFLKYNF---------------NISKGPISIKWMEGASTNLCYNLLDRNVRNGLGD 98
            |.|.||      |:||               ..|.|| ::.||.|:...|.:|            
  Rat    37 HQEVPA------KFNFASDVIDHWASLEKAGKRSPGP-ALWWMNGSGEELKWN------------ 82

  Fly    99 QIAYYWEGNHPDDYSRGLTYRKLLEEVCRFANVLKDH-GIRKGDRVSIYMPMILELPIAMLACAR 162
                               :|:|.|...:.||||... |:::||||::.:|.:.|..:..|.|.|
  Rat    83 -------------------FRELSEISKQTANVLTGACGLQRGDRVAVVLPRVPEWWLVTLGCMR 128

  Fly   163 IGAVHSIVFAGFSPDSLAERMFDCKAKLLITADGAWRGEKPLYLKALCDTALEKVEEMGHSVEKC 227
            .|.|............:..|:...||:.::..|                   |.|:|:......|
  Rat   129 SGLVFMPGTTQMKSTDILYRLQSSKARAIVAGD-------------------EVVQEVDAVAPDC 174

  Fly   228 IVVSHLKRVTPCQPDHVEEEIPWTDDRDYWWHEE--MEDKEPACYPEWMDAEDPLFMLYTSGSTG 290
            ..:. :|.:       |.|:     :|:.|.:.:  ::|..|........:::...:.:|||::|
  Rat   175 SFLK-IKLL-------VSEK-----NREGWLNFKALLKDASPIHQCVETVSQESAAIYFTSGTSG 226

  Fly   291 KPKGVLHTTAGYLLYAATTFKIVFD-----YKPGDIYWCTGDVGWITGHTYVVYGPLANGATSVI 350
            .||...|:      :.:...|...|     ..|.|..|...|.|||.........|...|....:
  Rat   227 PPKMAEHS------HCSLGLKAKMDAGWTGLGPSDTMWTISDTGWILNILGSFLEPWVLGTCIFV 285

  Fly   351 FEGTPFFPGNDRYWSVIDKYKVTQFYTAPTAIRALM-------KFGEGPVLKHNLSGLKVLGSVG 408
            .....|.|  .....|:..|.:.....||...|.|:       ||   |.|....||       |
  Rat   286 HLLPKFDP--QTVLKVLSSYPINTLLGAPLIYRMLLQQDLSSYKF---PHLHSCFSG-------G 338

  Fly   409 EPINP---EAWLWYYKYIGKEQCSIVDTFWQTETGGHVITPLPGATPMKPGSASFPFFGVKPTLL 470
            |.:.|   |:|.      .|....|.:.:.|||||  :...:.....:|||............::
  Rat   339 ETLLPETLESWK------AKTGLEIREIYGQTETG--ITCRVSRTMKVKPGYLGTAIVPYDVQVI 395

  Fly   471 DECGIEIKGEGEGYLVFS----QPWPGMMRTLYNNHERFEDTYFSKFPGYYCTGDGARRDADGYL 531
            ||.|..:....||.:...    :| .||.....:|.::.:......|   :..||...:|.:||.
  Rat   396 DEQGNVLPPGKEGDMALRVKPIRP-IGMFSGYVDNPKKTQANIRGDF---WLLGDRGIKDTEGYF 456

  Fly   532 WITGRVDDMLNVSGHLMSTAEVESVLTEHPRVAESAVVSRPHPVKGECLYCFI--TPNENEVFDQ 594
            ...||.||::|.||:.:..:|||:.|.|||.|.|:||:|.|.|::.|.:..|:  .|........
  Rat   457 HFMGRTDDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPIRREVVKAFVVLAPEFLSHDQD 521

  Fly   595 KLISDLKKMVRERIGPFAMPDVIQNAPGLPKTRSGKIMRRVLR 637
            :|...|::.|:....|:..|..::....||||.:|||.|..||
  Rat   522 QLTKVLQEHVKSVTAPYKYPRKVEFVLDLPKTITGKIERAKLR 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_001014599.2 PRK00174 7..665 CDD:234677 150/628 (24%)
ACS 30..654 CDD:213313 150/628 (24%)
Acsm2NP_653349.1 AFD_class_I 40..568 CDD:302604 148/625 (24%)
Acs 40..565 CDD:223442 148/625 (24%)
Coenzyme A binding. /evidence=ECO:0000250 469..471 1/1 (100%)
Coenzyme A binding. /evidence=ECO:0000250 540..542 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0365
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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