DRSC/TRiP Functional Genomics Resources

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Protein Alignment AcCoAS and Acsm4

DIOPT Version :9

Sequence 1:NP_001014599.2 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_848501.1 Gene:Acsm4 / 233801 MGIID:2681844 Length:580 Species:Mus musculus


Alignment Length:651 Identity:190/651 - (29%)
Similarity:266/651 - (40%) Gaps:139/651 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LDNPAEFWSRVAKQFH-----WETPADQDKF---------LKYNFNISKGPI---SIKWMEG--- 78
            |..||      .:.||     | .|...|.|         |..|||.:...:   |:|...|   
Mouse    15 LAKPA------GRHFHRDSQLW-APLTLDDFEAINRCEKPLPKNFNFAADVLDQWSLKEKSGERP 72

  Fly    79 ASTNLCYNLLDRNVRNGLGDQIAYYWEGNHPDDYSRGLTYRKLLEEVCRFANVL-KDHGIRKGDR 142
            |:..|.:       .||.||::.  |........||            :.|||| |..|:::|||
Mouse    73 ANPALWW-------VNGKGDEVK--WSFQELGSLSR------------KAANVLTKPCGLQRGDR 116

  Fly   143 VSIYMPMILELPIAMLACARIGAVHSIVFAGFSPDSLAERMFDCKAKLLITADGAWRGEKPLYLK 207
            |::.:|.|.|..:..:||.|.|.|       |.|.::.....|...:|..:             |
Mouse   117 VAVILPRIPEWWLINVACMRTGLV-------FMPGTIQLTRKDILYRLQAS-------------K 161

  Fly   208 ALCDTALEKVEEMGHS-VEKCIVVSHLKRVTPCQPDHVEEEIPWTDDRDYWWH-EEM---EDKEP 267
            |.|..|.|:|.....| |.:|   ..||......|.|      |    |.|.: :|:   ..:|.
Mouse   162 AKCIVASEEVAPAVDSIVSEC---PSLKTKLLVSPHH------W----DGWLNFQELLQSASEEH 213

  Fly   268 ACYPEWMDAEDPLFMLYTSGSTGKPKGVLHTTA----GYLLYAATTFKIVFDYKPGDIYWCTGDV 328
            .|..  ..:::|:.:.:|||:||.||...|:..    ||.|..    :...|....||.|...|.
Mouse   214 NCVE--TGSQEPMAIYFTSGTTGSPKMAQHSQGSLGIGYTLCG----RYWLDLTSSDIMWNMSDT 272

  Fly   329 GWITGHTYVVYGPLANGATSVIFEGTPFFPGNDRYWSVIDKYKVTQFYTAPTAIRAL----MKFG 389
            |||......|:.....||...:.....|  ..|.:...:..|.:|...:|||..|.|    :|..
Mouse   273 GWIKAAIGSVFSTWLRGACVFVHRMAQF--DTDIFLDTLTTYPITTLCSAPTVYRMLVQKDLKRY 335

  Fly   390 EGPVLKHNLSGLKVLGSVGEPINPEAWLWYYKYIGKEQCSIVDTFWQTETGGHVITPLPGATPMK 454
            :...|:|.|:|       |||:|||....:....|.|   :.:.:.|||.|  :|........:|
Mouse   336 QFKRLRHCLTG-------GEPLNPEVLEQWKMQTGLE---LYEGYGQTEVG--IICANRKGEAIK 388

  Fly   455 PGSASFPFFGVKP---TLLDECG--IEIKGEGEGYLVFSQPWPGMMRTLY-NNHERFEDTYFSKF 513
            |||..   .||.|   .::||.|  :....|||..|......|....:.| :|.|:.:.|....|
Mouse   389 PGSMG---KGVVPYDVQIIDENGNILPSGKEGEIALRLKSDRPFCFFSEYVDNPEKTDATIRRNF 450

  Fly   514 PGYYCTGDGARRDADGYLWITGRVDDMLNVSGHLMSTAEVESVLTEHPRVAESAVVSRPHPVKGE 578
               |.|||....|.|||.|..||.||::..||:.:...||||.|.|||.|.||||||.|.|::||
Mouse   451 ---YVTGDRGVMDDDGYFWFVGRADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPIRGE 512

  Fly   579 CLYCFIT-------PNENEVFDQKLISDLKKMVRERIGPFAMPDVIQNAPGLPKTRSGKIMRRVL 636
            .:..||.       .|.     :||.::|:..|:....|:..|..::....||||.:|||.|.||
Mouse   513 VVKAFIVLAAPYKCSNR-----EKLTAELQDHVKNSTAPYKYPRKVEFVQELPKTITGKIKRNVL 572

  Fly   637 R 637
            |
Mouse   573 R 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_001014599.2 PRK00174 7..665 CDD:234677 190/651 (29%)
ACS 30..654 CDD:213313 190/651 (29%)
Acsm4NP_848501.1 MACS_euk 48..577 CDD:213294 181/611 (30%)
Acs 49..576 CDD:223442 180/610 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0365
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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