DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AcCoAS and Acsm3

DIOPT Version :9

Sequence 1:NP_001014599.2 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_017177549.1 Gene:Acsm3 / 20216 MGIID:99538 Length:593 Species:Mus musculus


Alignment Length:622 Identity:178/622 - (28%)
Similarity:269/622 - (43%) Gaps:103/622 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FEEYQKFYQESLDNPAEFWSRVAKQFHWETPADQDKFLKYNFNISKGPISIKW--MEGAS---TN 82
            :::|:....::..|    :..:.:.|..|.|       :| ||.:|..:. :|  ||.|.   :|
Mouse    23 YKDYRTATPQNFSN----YESMKQDFKIEIP-------EY-FNFAKDVLD-QWTNMEKAGKRLSN 74

  Fly    83 LCYNLLDRNVRNGLGDQIAYYWEGNHPDDYSRGLTYRKLLEEVCRFANVLKDH-GIRKGDRVSIY 146
            ..:..:|.|     |:::.:.:|       ..||..||       |||:|.:. .:::||||.:.
Mouse    75 PAFWWIDGN-----GEELRWSFE-------ELGLLSRK-------FANILTEACSLQRGDRVMVI 120

  Fly   147 MPMILELPIAMLACARIGAVHSIVFAGFSPDSLAERMFDCKAKLLITADGAWRGEKPLYLKALCD 211
            :|.|.|..:|.:||.|.|.|........:...:..|:...|||.:||.|         .|....|
Mouse   121 LPKIPEWWLANVACLRTGTVLIPGTTQLTQKDILYRLQSSKAKCIITDD---------TLAPAVD 176

  Fly   212 TALEKVEEMGHSVEKCIVVSHLKRVTPCQPDHVEEEIPWTDDRDYWWHEEMEDKEPACYPEWMDA 276
            ....|.|.: ||  |.||..|.:...    .:::|.:.:..|.    |..::.|.          
Mouse   177 AVAAKCENL-HS--KLIVSQHSREGW----GNLKEMMKYASDS----HTCVDTKH---------- 220

  Fly   277 EDPLFMLYTSGSTGKPKGVLHTTAGYLLYAATTFKIVFDYKPGDIYWCTGDVGWITGHTYVVYGP 341
            ::.:.:.:|||:||.||.:.||.:.:.|..:...:...|....|:.|.|.|.||.......|:.|
Mouse   221 DEMMAIYFTSGTTGPPKMIGHTHSSFGLGLSVNGRFWLDLIASDVMWNTSDTGWAKSAWSSVFSP 285

  Fly   342 LANGATSVI-----FEGTPFFPGNDRYWSVIDKYKVTQFYTAPTAIRALMKFGEGPVLKHNLSGL 401
            ...||....     ||.|...       ..:.|:.:|.|.:||||.|.|::.......|.|  .|
Mouse   286 WTQGACVFAHYLPRFESTSIL-------QTLSKFPITVFCSAPTAYRMLVQNDMSRSYKFN--SL 341

  Fly   402 KVLGSVGEPINPEAWLWYYKYIGKEQCSIVDTFWQTETGGHVITPLPGATPMKPGSAS--FPFFG 464
            |...|.|||||||....:.|..|.:   |.:.:.||||  .:|........:||||..  .|.|.
Mouse   342 KHCVSAGEPINPEVMEQWRKKTGLD---IYEGYGQTET--VLICGNFKGMKIKPGSMGKPSPAFD 401

  Fly   465 VKPTLLDECGIEIKGEGEGYLVF----SQPWPGMMRTLYNNHERFEDTYFSKFPGYYCTGDGARR 525
            ||  :|||.|..:....||.:..    .:|: |:.....:|..:...|....|   |.|||....
Mouse   402 VK--ILDENGATLPPGQEGDIALQVLPERPF-GLFTHYVDNPSKTASTLRGSF---YITGDRGYM 460

  Fly   526 DADGYLWITGRVDDMLNVSGHLMSTAEVESVLTEHPRVAESAVVSRPHPVKGECLYCFITPN-EN 589
            |.|||.|...|.||::..||:.:...||||.|.|||.:|||||||.|.|::||.:..||..| :.
Mouse   461 DEDGYFWFVARSDDIILSSGYRIGPFEVESALIEHPSIAESAVVSSPDPIRGEVVKAFIVLNPDY 525

  Fly   590 EVFDQKLISDLKKMVRERIGPFAMPDVIQNAPGLPKT 626
            :..||:   .|||.::|.:.....|.......|:|.|
Mouse   526 KSHDQE---QLKKEIQEHVKKTTAPYKYPRKVGVPGT 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_001014599.2 PRK00174 7..665 CDD:234677 178/622 (29%)
ACS 30..654 CDD:213313 177/615 (29%)
Acsm3XP_017177549.1 AFD_class_I 48..554 CDD:388389 171/586 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0365
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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