DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AcCoAS and Acsm1

DIOPT Version :9

Sequence 1:NP_001014599.2 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_006507277.1 Gene:Acsm1 / 117147 MGIID:2152200 Length:601 Species:Mus musculus


Alignment Length:558 Identity:135/558 - (24%)
Similarity:211/558 - (37%) Gaps:144/558 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DNPAEFWSRVAKQFHWETPADQDKFLKYNFNISKGPISIKWMEGASTNLCYNLLDRNVRNGLGDQ 99
            |:|.||........:|....::.|         :||....|..                ||.||:
Mouse    40 DSPEEFNFASDVLDYWAQMEEEGK---------RGPSPAFWWV----------------NGQGDE 79

  Fly   100 IAYYWEGNHPDDYSRGLTYRKLLEEVCRFANVLKD-HGIRKGDRVSIYMPMILELPIAMLACARI 163
            |.:              ::|||.:..||.|||.:. .|:::||.:::.:|.:.|..:..:.|.|.
Mouse    80 IKW--------------SFRKLRDLTCRTANVFEQICGLQQGDHLALILPRVPEWWLVTVGCMRT 130

  Fly   164 GAVHSIVFAGFSPDSLAERMFDCKAKLLITADGAWRGEKPLYLKALCDTALEKVEEMGHSVEKC- 227
            |.:       |.|.:...:..|...::.|:.           .||:..|| ..|.|:.....:| 
Mouse   131 GII-------FMPGTTQLKAKDILYRIQISR-----------AKAIVTTA-SLVPEVESVASECP 176

  Fly   228 -----IVVSHLKRVTPCQPDHVEEEIPWTDDRDYWWHEEMEDKEP--ACYPEWMDAEDPLFMLYT 285
                 :|||          ||..|  .|.|     :...::...|  .|....|  :||:.:.:|
Mouse   177 DLKTKLVVS----------DHSHE--GWLD-----FCSLIKSASPDHTCIKSKM--KDPMAIFFT 222

  Fly   286 SGSTGKPKGVLHTTA-GYLLYAATTFKIVFDYKPGDIYWCTGDVGWITGHTYVVYGPLANGATSV 349
            ||:||.||...|... .:..|..:..|:: ..|..||.||..|.|||......:..|..:|.|..
Mouse   223 SGTTGYPKMAKHNQGLAFRSYIPSCRKLL-KLKTSDILWCMSDPGWILATVGCLIEPWTSGCTVF 286

  Fly   350 IFEGTPFFPGNDRYWSVIDKYKVTQFYTAPTAIRAL-------MKFGEGPVLKHNLSGLKVLGSV 407
            |.....|.|  .....|:.||.:||...||...|.:       ::|   |.|:|..:|       
Mouse   287 IHHLPQFDP--KVIVEVLFKYPITQCLAAPGVYRMVLQQKTSNLRF---PTLEHCTTG------- 339

  Fly   408 GEPINPEAWLWYYKYIGKEQCSIVDTFWQTETGGHVITPLPGAT----PMKPGS---ASFPFFGV 465
            ||.:.||.   |.::..:...||.:.:.|:|||      :..||    .:|.||   |..||   
Mouse   340 GESLLPEE---YEQWKQRTGLSIHEVYGQSETG------ISSATLREMKIKRGSIGKAILPF--- 392

  Fly   466 KPTLLDECGIEIKGEGEGYLVF----SQPWPGMMRTLYNNH------ERFEDTYFSKFPGYYCTG 520
            ...::||.|..:....|||:..    ::|. |:......:|      ||......|   |..|.|
Mouse   393 DLQIIDEKGNILPPNTEGYIGIRIKPTRPL-GLFMEYEVSHRACRGGERLGGAPSS---GRVCGG 453

  Fly   521 D----GARRDADGYLWITGRVDDMLNVSGHLMSTAEVE 554
            :    |:||..:|......||....:.:.:..:||..|
Mouse   454 EQPGQGSRRGGEGVYCPQPRVPVTRSGTAYQRATASCE 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_001014599.2 PRK00174 7..665 CDD:234677 135/558 (24%)
ACS 30..654 CDD:213313 135/558 (24%)
Acsm1XP_006507277.1 AFD_class_I 42..>429 CDD:388389 118/489 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0365
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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