DRSC/TRiP Functional Genomics Resources

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Protein Alignment AcCoAS and acsm3

DIOPT Version :9

Sequence 1:NP_001014599.2 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_002932029.3 Gene:acsm3 / 100491087 XenbaseID:XB-GENE-486978 Length:581 Species:Xenopus tropicalis


Alignment Length:635 Identity:181/635 - (28%)
Similarity:252/635 - (39%) Gaps:140/635 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TPAD----QDKFLKYN------FNISKGPISIKWM-----EGASTNLCYNLLDRNVRNGLGDQIA 101
            ||.:    :|..|.|.      ||.:...|. :|.     .|.|:|.....:|     |.|:::.
 Frog    31 TPQNFSNYEDIKLNYKPKVPEYFNFANDIID-EWAINRKEAGKSSNPALWWID-----GSGEEVK 89

  Fly   102 YYWEGNHPDDYSRGLTYRKLLEEVCRFANVLKDH-GIRKGDRVSIYMPMILELPIAMLACARIGA 165
            :.:|       ..|...||.       ||||.|. .::.||||.:.:|.:.|..:..:||.|.|.
 Frog    90 WSFE-------ELGFLSRKA-------ANVLSDACNLKPGDRVIVILPRVPEWWLLNVACIRAGV 140

  Fly   166 VHSIVFAGFSPDSLAERMFDCKAKLLITADGAWRGEKPLYLKALCDTALEKVEEMGHSVEKCIVV 230
            |........:...:..|:....||.:||:|                               |:|.
 Frog   141 VLIPGTTQLTAKDILHRLQTSMAKCIITSD-------------------------------CLVE 174

  Fly   231 SHLKRVTPCQPDHVEEEIPW--------TDDRDYW-----WHEEMEDKEPACYPEWMDAEDPLFM 282
            :         .|.|..:.|:        |:.||.|     ..:...||......:   :.||:.:
 Frog   175 A---------VDSVAAQSPFLQTKMLISTERRDGWLDFKGLFQVANDKHTCVKTK---SSDPMTI 227

  Fly   283 LYTSGSTGKPKGVLHTTAGYLLYAATTFKIVFDYKPGDIYWCTGDVGWITGHTYVVYGPLANGAT 347
            .:|||:||.||...|:...|.|......|...|..|.||.|...|.||.......|:.|...| :
 Frog   228 FFTSGTTGSPKMTEHSHCSYGLGLKVNGKYWMDLTPTDIVWNMSDTGWAKSAWSSVFAPWIQG-S 291

  Fly   348 SVIFEGTPFFPGNDRYWSVIDKYKVTQFYTAPTAIR--ALMKFGEGPVLKHNLSGLKVLGSVGEP 410
            .|.....|.|..| .....:..:.:|.|.:||||.|  .|..|.     .:....|:...|.|||
 Frog   292 CVFAHSMPRFDTN-IVLKTLSTFPITTFCSAPTAYRMLVLQNFA-----SYKFKSLQHCVSAGEP 350

  Fly   411 INP---EAWLWYYKYIGKEQ--CSIVDTFWQTETGGHVITPLPGATPMKPGSASFPFFGVKPTLL 470
            |||   |.|        |||  ..|.:.:.||||  .:|........:||||...|.......::
 Frog   351 INPQVMEQW--------KEQTGLDIYEGYGQTET--VLICGTFKGMKIKPGSMGKPSPAYDVEIV 405

  Fly   471 DECGIEIKGEGEG-----------YLVFSQPWPGMMRTLYNNHERFEDTYFSKFPGYYCTGDGAR 524
            ||.|..:....||           :.:|||         |....  |.|..::...:|.|||...
 Frog   406 DENGNVLPQGKEGDIAIRILPQKPFCLFSQ---------YTGDP--ERTASTRRGNFYLTGDRGI 459

  Fly   525 RDADGYLWITGRVDDMLNVSGHLMSTAEVESVLTEHPRVAESAVVSRPHPVKGECLYCFI--TPN 587
            :|.|||.|..||.||::..||:.:...||||.|.|||.||||||||.|.|::||.:..|:  .|.
 Frog   460 KDEDGYFWFVGRSDDVILSSGYRIGPFEVESALIEHPAVAESAVVSSPDPIRGEVVKAFVVLAPA 524

  Fly   588 ENEVFDQKLISDLKKMVRERIGPFAMPDVIQNAPGLPKTRSGKIMRRVLR 637
            .|....:||..:|::.||....|:..|..|:....||||.||||.|..||
 Frog   525 YNGYDPEKLALELQEHVRNITAPYKYPRKIEFVQQLPKTVSGKIRRNELR 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_001014599.2 PRK00174 7..665 CDD:234677 181/635 (29%)
ACS 30..654 CDD:213313 181/635 (29%)
acsm3XP_002932029.3 MACS_euk 49..578 CDD:341251 176/617 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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