DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AcCoAS and acss3

DIOPT Version :9

Sequence 1:NP_001014599.2 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:XP_002931666.2 Gene:acss3 / 100489184 XenbaseID:XB-GENE-6035224 Length:712 Species:Xenopus tropicalis


Alignment Length:661 Identity:237/661 - (35%)
Similarity:353/661 - (53%) Gaps:47/661 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ISQNAYISSFE-----EYQKFYQESLDNPAEFWSRVAKQFHWETPADQDKFLKYNFNISKGPISI 73
            :|.:.|.:..|     .|:..:|.|:..|.:.|...|....|..|..:   :..|.|    |...
 Frog    70 LSTHKYSTLHENCFPANYEHIFQSSVQEPEKVWGEAAGNIAWFKPWSK---IMDNSN----PPFT 127

  Fly    74 KWMEGASTNLCYNLLDRNVRNGLGDQIAYYWEGNHPDDYSRGLTYRKLLEEVCRFANVLKDHGIR 138
            ||......|:|||.:||::.:|.|||.|..:: :...:..:.:||:::.|:|.|.|:||..:|::
 Frog   128 KWFIDGELNICYNAVDRHIESGRGDQPAIIYD-SPVTNTKQAITYKEIYEQVSRLASVLCKYGVK 191

  Fly   139 KGDRVSIYMPMILELPIAMLACARIGAVHSIVFAGFSPDSLAERMFDCKAKLLITAD-GAWRGEK 202
            |||||.||||||.:...||||||||||:||::|.||:...||.|:...|.||:|||. |...|.|
 Frog   192 KGDRVVIYMPMIPQATYAMLACARIGAIHSLIFGGFASKELAVRIDHAKPKLIITASFGIEPGRK 256

  Fly   203 PLYLKALCDTALEKVEEMGHSVEKCIVVSHLKRVTPCQPDHVEEEIPWTDDRDYWWHEEMEDKEP 267
            ..|: .|.:.|||..|   |..||.::.|        :|:  .:|:|....||..|.||:....|
 Frog   257 VEYV-PLVERALEIAE---HKPEKIVIYS--------RPN--MKEVPLKAGRDLDWTEEISKAHP 307

  Fly   268 -ACYPEWMDAEDPLFMLYTSGSTGKPKGVLHTTAGYLLYAATTFKIVFDYKPGDIYWCTGDVGWI 331
             .|.|  :.:|.||::|||||:||.||||:.::|||.:....|...::...|||::|...|:||:
 Frog   308 HDCVP--VSSEHPLYVLYTSGTTGLPKGVVRSSAGYTVMLNWTMSSIYGLNPGDVWWAASDLGWV 370

  Fly   332 TGHTYVVYGPLANGATSVIFEGTPF-FPGNDRYWSVIDKYKVTQFYTAPTAIRALMKFGEGPVLK 395
            .||:|:.||||.:|.|||::||.|. .|....|:.|:.::.|...:|||||:||:.:  :.|..:
 Frog   371 VGHSYICYGPLLHGNTSVLYEGKPVGTPDASAYFRVLSEHGVAAMFTAPTALRAIRQ--QDPEAE 433

  Fly   396 ----HNLSGLKVLGSVGEPINPEAWLWYYKYIGKEQCSIVDTFWQTETGGHVITPLPG-ATPMKP 455
                .:|:..:.|...||..:.|...|..:..   :..::|.:||||||..:.....| ...:||
 Frog   434 LGKPFSLTKFRTLFVAGERCDVETLEWSRQIF---KVPVLDHWWQTETGSPITATCIGLGNSLKP 495

  Fly   456 --GSASFPFFGVKPTLLDECGIEIKGEGEGYLVFSQPW-PGMMRTLYNNHERFEDTYFSKFPGYY 517
              |.|..|..|....:||....|......|.:|...|. ||...||:.|...|:|.||:||||||
 Frog   496 PAGQAGKPVPGYNVKILDNDMQEANPNTLGNIVVKLPLPPGAFATLWKNDAMFQDLYFTKFPGYY 560

  Fly   518 CTGDGARRDADGYLWITGRVDDMLNVSGHLMSTAEVESVLTEHPRVAESAVVSRPHPVKGEC-LY 581
            .|.|...:|.|||:::..||||::||:||.:|...:|..:..|..||:.|||....|:||.. |.
 Frog   561 DTMDAGYKDEDGYIYVLSRVDDVINVAGHRLSAGAIEESVLLHKAVADCAVVGLEDPLKGHVPLA 625

  Fly   582 CFITPNENEVFDQKLISDLKKMVRERIGPFAMPDVIQNAPGLPKTRSGKIMRRVLRKIAVNDRNV 646
            ..:..|..:...:.:.:::..:|||.|||.|....:.....|||||||||.|..|..: ||.::.
 Frog   626 LCVLRNGVDKTTETIENEIVALVREYIGPVAAFRKVVIVKQLPKTRSGKIPRSTLSAL-VNGKSY 689

  Fly   647 GDTSTLADEQI 657
            ...||:.|..:
 Frog   690 KIGSTIEDPDV 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_001014599.2 PRK00174 7..665 CDD:234677 237/661 (36%)
ACS 30..654 CDD:213313 232/635 (37%)
acss3XP_002931666.2 PrpE 87..704 CDD:341271 234/644 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D148550at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.