DRSC/TRiP Functional Genomics Resources

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Protein Alignment AcCoAS and acsm3

DIOPT Version :9

Sequence 1:NP_001014599.2 Gene:AcCoAS / 40348 FlyBaseID:FBgn0012034 Length:670 Species:Drosophila melanogaster
Sequence 2:NP_001104706.1 Gene:acsm3 / 100002035 ZFINID:ZDB-GENE-080220-22 Length:591 Species:Danio rerio


Alignment Length:659 Identity:182/659 - (27%)
Similarity:275/659 - (41%) Gaps:114/659 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NAYISSFEEYQKFYQESLDNPAEFWSRVAKQFHWETPADQDKFLKY-------------NFNISK 68
            |.|:.|...:::..:.|..|......:..:...::|.|.:: |..|             .||.:|
Zfish     2 NLYVFSNHVFKRCLKNSQRNEVYARGQWLQTCRFKTSAPKN-FSDYESMRSTYKIQVPQRFNFAK 65

  Fly    69 GPISIKWMEGASTNLCYNLLDRNVRNGLGDQI-AYYWEGNHPDDYSRGLTYRKLLEEV----CRF 128
            ..:. ||             :...::|....: |.:|..:|      |...|...||:    .:.
Zfish    66 DVLE-KW-------------ETKEKSGQRSSLPALWWVNDH------GTEVRWSFEELGFHSRKL 110

  Fly   129 ANVLKD-HGIRKGDRVSIYMPMILELPIAMLACARIGAVHSIVFAGFSPDSLAERMFDCKAKLLI 192
            ||||:. ..:.:||||.:.:|.:.|..:..:||.|.|.|.....:..:...:..|:....||.:|
Zfish   111 ANVLRQVCSLERGDRVFLILPRVPEWWLVNVACIRTGTVLIPGTSQLTARDMRHRLITSGAKCVI 175

  Fly   193 TADGAWRGEKPLYLKALCDT-ALEKVEEMGHSVEKCIVVSH------------LKRVTPCQPDHV 244
            |.:         .|..|.|| ||:     ..|:...:::||            :.||:   .|||
Zfish   176 TDE---------TLAPLLDTVALD-----CPSISTKLLLSHKPMDGWGNLTELMGRVS---DDHV 223

  Fly   245 EEEIPWTDDRDYWWHEEMEDKEPACYPEWMDAEDPLFMLYTSGSTGKPKGVLHTTAGYLLYAATT 309
                                    |..  ..:|:|:.:.:|||:||.||...|:...|.|.....
Zfish   224 ------------------------CVD--TSSEEPMTIFFTSGTTGSPKMTQHSHCSYGLGLTVN 262

  Fly   310 FKIVFDYKPGDIYWCTGDVGWITGHTYVVYGPLANGATSVIFEGTPFFPGNDRYWSVIDKYKVTQ 374
            .:...|....|::|.|.|.||.......|:.|...|| .|.....|.|..| .....:..|.:|.
Zfish   263 GRYWLDLTEQDVFWNTSDTGWAKSAWSSVFAPWIQGA-CVFVHHMPRFDTN-TVLKTLSHYPITT 325

  Fly   375 FYTAPTAIRALMKFGEGPVLKHNLSGLKVLGSVGEPINPEAWLWYYKYIGKEQCSIVDTFWQTET 439
            |.|||||.|.|:   :..:.|:....|:.....|||||||....:.:..|.:   |.:.:.||||
Zfish   326 FCTAPTAYRMLV---QDDLSKYKFQALEHCLCAGEPINPEVMCKWKELTGLD---IYEGYGQTET 384

  Fly   440 GGHVITPLPGATPMKPGSASFPFFGVKPTLLDECGIEI-KG-EGEGYLVFSQPWPGMMRTLYNNH 502
              .:|........:||||......|....::||.|..: || ||:..:......|..:.|.|...
Zfish   385 --VLIAGTFKGMKIKPGSFGKASPGYDVQVVDENGSVVPKGQEGDLGIRVKPERPFSLFTEYTGE 447

  Fly   503 E-RFEDTYFSKFPGYYCTGDGARRDADGYLWITGRVDDMLNVSGHLMSTAEVESVLTEHPRVAES 566
            . |..:.:...|   |.|||....|.:||||..||.||::..:|:.:...|||:.|.|||.||||
Zfish   448 PVRTAECFRGDF---YLTGDRGMMDDEGYLWFIGRSDDVILSAGYRIGPFEVENALIEHPAVAES 509

  Fly   567 AVVSRPHPVKGECLYCFI--TPNENEVFDQKLISDLKKMVRERIGPFAMPDVIQNAPGLPKTRSG 629
            ||||.|.||:||.:..|:  |.:......::||.:|:..|:....|:..|..|:....||||.||
Zfish   510 AVVSSPDPVRGEVVKAFVVLTADFKSRAHKELIKELQTHVKSITAPYKYPRKIEFVDQLPKTVSG 574

  Fly   630 KIMRRVLRK 638
            ||.|..|||
Zfish   575 KIRRVELRK 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcCoASNP_001014599.2 PRK00174 7..665 CDD:234677 182/659 (28%)
ACS 30..654 CDD:213313 179/646 (28%)
acsm3NP_001104706.1 Acs 54..583 CDD:223442 171/604 (28%)
AFD_class_I 57..586 CDD:302604 173/603 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0365
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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