DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eip78C and rora

DIOPT Version :9

Sequence 1:NP_001246862.1 Gene:Eip78C / 40345 FlyBaseID:FBgn0004865 Length:862 Species:Drosophila melanogaster
Sequence 2:XP_012822203.1 Gene:rora / 780120 XenbaseID:XB-GENE-478535 Length:464 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip78CNP_001246862.1 NR_DBD_DmE78_like 363..443 CDD:143539
NR_LBD_DmE78_like 659..854 CDD:132739
roraXP_012822203.1 NR_DBD_ROR 11..105 CDD:143526
NR_LBD_ROR_like 213..452 CDD:132737
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001077
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45805
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X649
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.100

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