Protein Alignment Eip78C and rorcb

DIOPT Version :9

• Sequence 1: NP_001246862.1
• Gene: Eip78C / 40345
• FlyBaseID: FBgn0004865
• Length: 862
• Species: Drosophila melanogaster
• Sequence 2: NP_001264023.1
• Gene: rorcb / 562258
• ZFINID: ZDB-GENE-040724-215
• Length: 480
• Species: Danio rerio
• Alignment Length: 526
• Identity: 158/526 - (30%)
• Similarity: 252/526 - (47%)
• Gaps: 98/526 - (18%)

  Fly   361 VPCKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGKCLVIRLNRNRCQYCRFKKCLS 425
            :|||:||||:||.||||.:|||||||||||.|....|.|.|...||:.|.||||||:||.:|||:
Zfish     8 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRNRCQHCRLQKCLA 72

  Fly   426 AGMSRDSVRYGRVPKRSRELNGAAASSAAAGAPASLNVDDSTSSTLHPSHLQQQQQQHLLQQQQQ 490
            .|||||:|::||:.|:.|:                              .|..:.|:|   ||..
Zfish    73 LGMSRDAVKFGRMSKKQRD------------------------------SLYAEVQRH---QQLS 104

  Fly   491 QQHQPQLQQHHQLQ----QQPHVSGVRVKT------------------PSTP-QTPQMCSIASSP 532
            |.....|....:.:    .:|:.||....|                  |.|| :..:.|::
Zfish   105 QDCLAGLTGRDEAEDGAHSRPYSSGGSSSTLSDLDDIATLPDGLLFDLPLTPEEAGEYCAL---- 165

  Fly   533 SELGGCNSANNNNNNNNNSSSGNASGGSGVSVGVVVVGGHQQLVGGSMVGMAGMGTDAHQVGMCH 597
             |:....:.:..:.:.::|||.::...|.|.:...|...|:.::..:.             .:.|
Zfish   166 -EMLSSGTGSGGSGSGSSSSSQSSPEPSAVDLADAVRVKHEYIMPDNS-------------RLTH 216

  Fly   598 DGLAGTANELTVYD---VIMCVSQAHRLNCSY-TEELTRELMRRPVTVPQNGIASTVAESLEFQ- 657
            ..|....:..:::|   :...|.::|...|.| ||||.:....          ..|..|:..||
Zfish   217 SLLGSIPDNCSLHDIERITQNVVKSHLETCQYSTEELKKHTWS----------LYTPEETRSFQL 271

  Fly   658 --KIWLWQQFSARVTPGVQRIVEFAKRVPGFCDFTQDDQLILIKLGFFEVWLTHVARLINEATLT 720
              ..|:|||.:.::|..:|.:||||||:.||.:..|:||:||:|.|..||.|..:.|..|.:..|
Zfish   272 KSAEWMWQQCALQITNAIQYVVEFAKRISGFMELCQNDQIILLKAGCLEVLLIRMCRAYNSSNNT 336

  Fly   721 L-DDGAYLTRQQLEILYDSDFVNALLNFANTLNAYGLSDTEIGLFSAMVLLASDRAGLSEPKVIG 784
            : .||.:.:.|..:.|...|.|||:...|.:|:...||:.|:.|:||.||||.||..|:|.:.:.
Zfish   337 MFFDGKFASPQLFKALGCDDLVNAVFELAKSLSRLQLSEEEMALYSAAVLLAPDRPWLTESQQVQ 401

  Fly   785 RARELVAEALRVQILRSRAGSPQALQLMPALEAKIPELRSLGAKHFSHLDWLRM--NWTKLRLPP 847
            :.:|.|..||:..:..:.|    .::.:..:.:|:|:::|:...|...|::.|:  ..|....||
Zfish   402 KLQEKVYVALQHSLHMNGA----TIEKLDKMVSKLPQMKSICNLHIDKLEFFRLVHPETAYSFPP 462

  Fly   848 LFAEIF 853
            |:.|:|
Zfish   463 LYREVF 468

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Eip78C	NP_001246862.1	NR_DBD_DmE78_like	363..443	CDD:143539	50/79 (63%)
		NR_LBD_DmE78_like	659..854	CDD:132739	68/198 (34%)
rorcb	NP_001264023.1	NR_DBD_ROR	3..97	CDD:143526	53/118 (45%)
		NR_LBD	230..468	CDD:299703	80/251 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001077
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45805
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X649
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	5.010