Protein Alignment Eip78C and rorca

DIOPT Version :9

• Sequence 1: NP_001246862.1
• Gene: Eip78C / 40345
• FlyBaseID: FBgn0004865
• Length: 862
• Species: Drosophila melanogaster
• Sequence 2: NP_001076288.1
• Gene: rorca / 559245
• ZFINID: ZDB-GENE-990415-250
• Length: 479
• Species: Danio rerio
• Alignment Length: 529
• Identity: 152/529 - (28%)
• Similarity: 240/529 - (45%)
• Gaps: 105/529 - (19%)

  Fly   361 VPCKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGKCLVIRLNRNRCQYCRFKKCLS 425
            :|||:||||:||.||||.:|||||||||||.|....|.|.|...|::.|.||||||:||.:|||:
Zfish     8 IPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCIIDRTNRNRCQHCRLQKCLA 72

  Fly   426 AGMSRDSVRYGRVPKRSRELNGAAASSAAAGAPASLNVDDSTSSTLHPSHLQQQQQQHLLQQQQQ 490
            .|||||:|::||:.|:.|:                              .|..:.|:|  ||.|:
Zfish    73 LGMSRDAVKFGRMSKKQRD------------------------------SLYAEVQKH--QQSQE 105

  Fly   491 Q---------QH--------------------QPQLQQHHQLQQQPHVSGVRVKTPSTP-QTPQM 525
            :         .|                    ...|.....:...|  .|:....|.|| :....
Zfish   106 RAGGLGNGISSHTGDEAGENGNGHSRAYSRGSSTTLSDLDDITTLP--DGLLFDLPLTPEEAADY 168

  Fly   526 CSIASSPSELGGCNSANNNNNNNNNSSSGNASGGSGVSVGVVVVGGHQQLVGGSMVGMAGMGTDA 590
            ||:    ..|||        ::.|:|||.::...:....|.|....|:.:             ..
Zfish   169 CSL----ELLGG--------SSGNSSSSQSSPESNRQEFGDVTHIKHEYM-------------SP 208

  Fly   591 HQVGMCHDGLAGTANELTVYDVIMCVSQAHRLNCSYTEELTRELMRRPVTVPQNGIASTVAESLE 655
            |:.|:....:.......::.::........:.:...::..|.||.|...|:      .|..|...
Zfish   209 HESGLFTRSILNPPEGCSLMEIERITQNVIKSHIETSQYSTEELKRLAWTL------YTPEEIRV 267

  Fly   656 FQK---IWLWQQFSARVTPGVQRIVEFAKRVPGFCDFTQDDQLILIKLGFFEVWLTHVARLINEA 717
            :|.   ..||||.:.::|..:|.:||||||:.||.|.:|:||:||:|.|..:|.|..:.|..|..
Zfish   268 YQNKPTEMLWQQCAVQLTNAIQYVVEFAKRISGFMDLSQNDQIILLKAGCLDVLLIRMCRAYNPI 332

  Fly   718 TLT-LDDGAYLTRQQLEILYDSDFVNALLNFANTLNAYGLSDTEIGLFSAMVLLASDRAGLSEPK 781
            ..| |.||.:.:.|..:.|...|.|:|:...|.||:...||..|:.||:|.|||:.||..|::.:
Zfish   333 NNTLLFDGKFASPQLFKALGCDDLVSAVFEMAKTLSRLQLSGEEMALFTATVLLSPDRPWLTDAQ 397

  Fly   782 VIGRARELVAEALRVQILRSRAGSPQALQLMPALEAKIPELRSLGAKHFSHLDWLRM--NWTKLR 844
            .:.:.:|.|..||:..:.:|.....:..:::    :|:|.::|:...|...|::.|:  ..|...
Zfish   398 KVQKLQEKVYVALQHYLHKSGVHEEKLARMV----SKLPMMKSICNLHIDKLEFFRLLHPETAYN 458

  Fly   845 LPPLFAEIF 853
            .|.|:.|:|
Zfish   459 FPALYREVF 467

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Eip78C	NP_001246862.1	NR_DBD_DmE78_like	363..443	CDD:143539	49/79 (62%)
		NR_LBD_DmE78_like	659..854	CDD:132739	66/198 (33%)
rorca	NP_001076288.1	NR_DBD_ROR	3..97	CDD:143526	52/118 (44%)
		NR_LBD	229..467	CDD:299703	73/247 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001077
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45805
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X649
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	4.010