Sequence 1: | NP_001246862.1 | Gene: | Eip78C / 40345 | FlyBaseID: | FBgn0004865 | Length: | 862 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005164086.1 | Gene: | rarab / 555364 | ZFINID: | ZDB-GENE-980526-72 | Length: | 460 | Species: | Danio rerio |
Alignment Length: | 498 | Identity: | 129/498 - (25%) |
---|---|---|---|
Similarity: | 193/498 - (38%) | Gaps: | 170/498 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 360 FVPCKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGKCLVIRLNRNRCQYCRFKKCL 424
Fly 425 SAGMSRDSVRYGRVPKRSRELNGAAASSAAAGAPASLNVDDSTSSTLHPSHLQQQQQQHLLQQQQ 489
Fly 490 QQQHQPQLQQHHQLQQQPHVSGVRVKTPSTPQT-PQMCSIASSPSELGGCNSANNNNNNNNNSSS 553
Fly 554 GNASGGSGVSVGVVVVGGHQQLVGGSMVGMAGMGTDAHQVGMCHDGLAGTANELTVYDVIMCVSQ 618
Fly 619 AHRLNCSYTEELTRELMRRPVTVPQNGIASTVAESLEFQKIWLWQQFSARVTPGVQRIVEFAKRV 683
Fly 684 PGFCDFTQDDQLILIKLGFFEVWLTHVARLI--NEATLTLDDGAYLTRQQLEILYDSDFVNALLN 746
Fly 747 FANTLNAYGLSDTEIGLFSAMVLLASDRAGLSEPKVIGRARELVAEALRVQILRSRAGSPQALQL 811
Fly 812 MPALEAKIPELRSLGAKHFSHLDWLRMNWTKLRLPPLFAEIFD 854 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Eip78C | NP_001246862.1 | NR_DBD_DmE78_like | 363..443 | CDD:143539 | 50/79 (63%) |
NR_LBD_DmE78_like | 659..854 | CDD:132739 | 60/196 (31%) | ||
rarab | XP_005164086.1 | NR_DBD_RAR | 80..155 | CDD:143522 | 45/72 (63%) |
NR_LBD_RAR | 184..413 | CDD:132735 | 74/366 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2459 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |