Sequence 1: | NP_001246862.1 | Gene: | Eip78C / 40345 | FlyBaseID: | FBgn0004865 | Length: | 862 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001124064.2 | Gene: | nr1d2a / 402815 | ZFINID: | ZDB-GENE-040504-1 | Length: | 504 | Species: | Danio rerio |
Alignment Length: | 603 | Identity: | 180/603 - (29%) |
---|---|---|---|
Similarity: | 266/603 - (44%) | Gaps: | 131/603 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 242 SSAAHSSPDSGCSSASSSGSSRSCGSSSASSSSSAVSSTISSGRSSNNSVVNPAATSSSVAHLNK 306
Fly 307 EQQQQPLPTTQLQQQQQHQQQLQHPQQQQSFGLADSSSSNGSS-NNNNGVSSKSFVPCKVCGDKA 370
Fly 371 SGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFKKCLSAGMSRDSVR 434
Fly 435 YGRVPKRSRELNGAAASSAAAGAPASLNVDDSTSSTLHPSHLQQQQQQHLLQQQQQQQHQPQLQQ 499
Fly 500 HHQLQQQPHVSGVRVKTPSTPQTPQMCSIASSPSELGGCNSANNNNNNNNNSSSGNASGGSGVSV 564
Fly 565 GVVVVGGHQQLVGGSMVGMAGMGTDAHQVGM-------CHDGLAGTANELTVYDVIMCVSQAHRL 622
Fly 623 NCSYTEELTRELMRRPVTVPQNGIASTVAESLEFQKIWLWQQFSARVTPGVQRIVEFAKRVPGFC 687
Fly 688 DFTQDDQLILIKLGFFEVWLTHVARL--INEATLTLDDGAYLTRQQLEILYDSDFVNALLNFANT 750
Fly 751 LNAYGLSDTEIGLFSAMVLLASDRAGLSEPKVIGRARELVAEALRVQILRSRAGSPQALQLMPAL 815
Fly 816 EAKIPELRSLGAKHFSHL 833 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Eip78C | NP_001246862.1 | NR_DBD_DmE78_like | 363..443 | CDD:143539 | 58/80 (73%) |
NR_LBD_DmE78_like | 659..854 | CDD:132739 | 57/177 (32%) | ||
nr1d2a | NP_001124064.2 | NR_DBD_REV_ERB | 81..169 | CDD:143540 | 59/128 (46%) |
NR_LBD | 314..502 | CDD:299703 | 59/189 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4846 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 232 | 1.000 | Inparanoid score | I3402 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45805 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.960 |