DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eip78C and Nr1d2

DIOPT Version :10

Sequence 1:NP_524195.2 Gene:Eip78C / 40345 FlyBaseID:FBgn0004865 Length:862 Species:Drosophila melanogaster
Sequence 2:NP_001412823.1 Gene:Nr1d2 / 353187 MGIID:2449205 Length:586 Species:Mus musculus


Alignment Length:688 Identity:205/688 - (29%)
Similarity:299/688 - (43%) Gaps:179/688 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 NGGGALYTISSVHQFGPASNHNTSSSSPSSSAAHSSPDSGCSSASSSGSSRSCGSSSASSSSSAV 277
            |.||.:..|||          ::|:|||:|          |.|..|..|.:       |||||..
Mouse     4 NAGGVIAYISS----------SSSASSPAS----------CHSEGSENSFQ-------SSSSSVP 41

  Fly   278 SSTISSGRSSNNSVVNPAATSSSVAHLNKEQQQQPLPTTQLQQQQQHQQQLQHPQQQQSFGLADS 342
            ||..||...:|.:..| |..||....|..::...|:.|                         ..
Mouse    42 SSPNSSNCDANGNPKN-ADISSIDGVLKSDRTDCPVKT-------------------------GK 80

  Fly   343 SSSNGSSNNNNGVSSKSFVP------------CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQI 395
            :|:.|.:.:::|:::..|:.            ||||||.|||:||||.:|||||||||||||:.|
Mouse    81 TSAPGMTKSHSGMTTFYFLSPYALEFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNI 145

  Fly   396 EY-RCLRDGKCLVIRLNRNRCQYCRFKKCLSAGMSRDSVRYGRVPKRSRELNGAAASSAAAGAPA 459
            :| :||::..|.::|:||||||.||||||||.|||||:||:||:|||.::.......||.     
Mouse   146 QYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAM----- 205

  Fly   460 SLNVDDSTSSTLHPSHLQ-----QQQQQHLLQQQQQQQHQPQLQQHHQLQQQP------HVSGVR 513
                 .:..:|....|||     :|..|..|..|:|.:.:.||:|.: ::..|      .|.|:.
Mouse   206 -----KTMMNTQFSGHLQNDTLAEQHDQSALPAQEQLRPKSQLEQEN-IKNTPSDFAKEEVIGMV 264

  Fly   514 VKTPSTP----QTPQMCSIASSPSELGGCNSANNNNNNNNNSSSGNASGGSGVSVGVVVVGGH-- 572
            .:.....    |..:..|..|.|.:.|.....|....|.|....     |||:.       .|  
Mouse   265 TRAHKDTFLYNQEHRENSSESMPPQRGERIPRNMEQYNLNQDHR-----GSGIH-------NHFP 317

  Fly   573 ----QQLVGGSMVGMAGMG-TDAHQVGMCHDGLAGTANELTVYDVIMCVSQAHRLN--------- 623
                ||.:.|...|...|. .:.|.|                     |::..|.:|         
Mouse   318 CSERQQHLSGQYKGRNIMHYPNGHAV---------------------CIANGHCMNFSSAYTQRV 361

  Fly   624 --------CSYTE-------------ELTRELMRRPVTVPQNGIASTVAESLEFQKIWLWQQFSA 667
                    ||.||             .|...:.:.|...||.....            :|::||.
Mouse   362 CDRIPVGGCSQTENRNSYLCNTGGRMHLVCPMSKSPYVDPQKSGHE------------IWEEFSM 414

  Fly   668 RVTPGVQRIVEFAKRVPGFCDFTQDDQLILIKLGFFEVWLTHVARLIN--EATLTLDDGAYLTRQ 730
            ..||.|:.:||||||:|||.|.:|.||:.|:|.|.|||.:...|.|.:  |.|:|...|...:..
Mouse   415 SFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVD 479

  Fly   731 QLEILYDSDFVNALLNFANTLNAYGLSDTEIGLFSAMVLLASDRAGLSEPKVIGRARELVAEALR 795
            .|..:...|.::::..|:..|||..|||.|:.||:|:||:::||:|:.....:...:|.:..|||
Mouse   480 DLHSMGAGDLLSSMFEFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALR 544

  Fly   796 VQILRSRAGSPQALQLMPALEAKIPELRSLGAKHFSHL 833
            ..|:::.   |....:...|..|:|:||||...|...|
Mouse   545 TLIMKNH---PNEASIFTKLLLKLPDLRSLNNMHSEEL 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip78CNP_524195.2 NR_DBD_DmE78_like 363..443 CDD:143539 58/80 (73%)
NR_LBD_DmE78_like 659..854 CDD:132739 64/177 (36%)
Nr1d2NP_001412823.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 225..256 9/31 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 273..292 4/18 (22%)
Interaction with ZNHIT1. /evidence=ECO:0000250 404..586 64/191 (34%)
Required for phosphorylation by CSNK1E and cytoplasmic localization. /evidence=ECO:0000269|PubMed:29533925 1..60 27/83 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 13..90 30/129 (23%)

Return to query results.
Submit another query.