Sequence 1: | NP_001246862.1 | Gene: | Eip78C / 40345 | FlyBaseID: | FBgn0004865 | Length: | 862 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038938751.1 | Gene: | Rora / 300807 | RGDID: | 1308419 | Length: | 523 | Species: | Rattus norvegicus |
Alignment Length: | 630 | Identity: | 163/630 - (25%) |
---|---|---|---|
Similarity: | 266/630 - (42%) | Gaps: | 141/630 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 244 AAHSSPDSGCSSASSSGSSRSCGSSSASSSSSAVSSTISSGRSSNNSVVNPAATSSSVAHLNKEQ 308
Fly 309 QQQPLPTTQLQQQQQHQQQLQHPQQQQSFGLADSSSSNG-SSNNNNGVSSKSFVPCKVCGDKASG 372
Fly 373 YHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGKCLVIRLNRNRCQYCRFKKCLSAGMSRDSVRYGR 437
Fly 438 VPKRSRELNGAAASSAAAGAPASLNVDDSTSSTLHPSHLQQQQQQHLLQQQQQQQHQPQLQQHHQ 502
Fly 503 LQQQPHVSGVRVKTPSTPQTPQMCSIASSPSELGGCNSANNNNNNNNNSSSGNASGGSGVSVGVV 567
Fly 568 VVGGHQQLVGGSMVGMAGMGTDAHQVGMC---------------HDGLAGTANELTVYDVIMCVS 617
Fly 618 QAHRLNCSYTEELTRELMRRPVTVPQNGIASTVAESLEFQKIWLWQQFSARVTPGVQRIVEFAKR 682
Fly 683 VPGFCDFTQDDQLILIKLGFFEVWLTHVARLINEATLTL-DDGAYLTRQQLEILYDSDFVNALLN 746
Fly 747 FANTLNAYGLSDTEIGLFSAMVLLASDRAGLSEPKVIGRARELVAEALRVQILRSRAGSPQALQL 811
Fly 812 MPALEAKIPELRSLGAKHFSHLDWLRMNW---TKLRLPPLFAEIF 853 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Eip78C | NP_001246862.1 | NR_DBD_DmE78_like | 363..443 | CDD:143539 | 49/79 (62%) |
NR_LBD_DmE78_like | 659..854 | CDD:132739 | 59/199 (30%) | ||
Rora | XP_038938751.1 | NR_DBD_ROR | 66..160 | CDD:143526 | 53/123 (43%) |
NR_LBD_ROR_like | 272..511 | CDD:132737 | 65/248 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001077 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45805 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X649 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.010 |