Protein Alignment Eip78C and nhr-159

DIOPT Version :10

• Sequence 1: NP_524195.2
• Gene: Eip78C / 40345
• FlyBaseID: FBgn0004865
• Length: 862
• Species: Drosophila melanogaster
• Sequence 2: NP_504069.2
• Gene: nhr-159 / 182732
• WormBaseID: WBGene00015902
• Length: 359
• Species: Caenorhabditis elegans
• Alignment Length: 343
• Identity: 77/343 - (22%)
• Similarity: 126/343 - (36%)
• Gaps: 97/343 - (28%)

  Fly   349 SNNNNGVSSKSFV---PCKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGKCLVIRL 410
            |::...:|..||:   .|.||...|...:|||.:|:.||.||||.:.:::||.|    ||
 Worm     2 SSSPPSLSEYSFIDPRKCLVCYRPAYCNNYGVLTCDACKMFFRRVVTEKLEYTC----KC----- 57

  Fly   411 NRN-------------RCQYCRFKKCLSAGMSRDSVRYG-RVPKRSRELNGAAASSAAAGAPASL 461
            :.|             :|:.||:::||..||:     |. |..||..|:.........|......
 Worm    58 SNNCFEGFSEDSTIYPKCKSCRYQECLKFGMN-----YAFRKQKRLLEIRNKKDDELDAIIDGLR 117

  Fly   462 NVDDSTSSTL-------HPSHLQQQQQQHLLQ---QQQQQQHQPQ-------LQQHHQLQQQPHV 509
            .:|:....||       :|: ||:..::..|:   :..::|.:||       ......|...|.:
 Worm   118 YLDNHRRETLRTKFTISNPT-LQEMVEKKGLETYVKTPKEQLRPQDWSFFALYTTVEFLSNMPFM 181

  Fly   510 SGVRVKTPSTPQTPQMCSIASSPSE----LGGCNSANNNNNNNNNSSSGNASGGSGVSVGVVVVG 570
            |.::.       ..:||.:.:|.|:    .|...|.|..                  ...::.|.
 Worm   182 SKLQT-------AEKMCLLRNSASKCSLFAGAMRSFNEK------------------KAEMITVD 221

  Fly   571 GHQQLVGGSMVGMAGMGTDAHQ-VGMCHDGLAGTANELTVY--------DVIMC---------VS 617
            | |.:...|::...|....|.: :|.....:.|...||||.        .:|.|         .|
 Worm   222 G-QDIYPNSILDFVGSSGGAREFLGRIKSMVVGKLAELTVLREEFLLISSIIFCNPDVFYEPENS 285

  Fly   618 QAHRLNCSYTEELTRELM 635
            .|.....|..:|.|..|:
 Worm   286 AAQSKVASQQQEFTAALL 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Eip78C	NP_524195.2	NR_DBD_DmE78_like	363..443	CDD:143539	31/93 (33%)
		NR_LBD_DmE78_like	659..854	CDD:132739
nhr-159	NP_504069.2	ZnF_C4	18..89	CDD:197701	26/79 (33%)
		HOLI	164..330	CDD:214658	30/166 (18%)