DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10508 and wwc1

DIOPT Version :9

Sequence 1:NP_001246859.1 Gene:CG10508 / 40342 FlyBaseID:FBgn0037060 Length:733 Species:Drosophila melanogaster
Sequence 2:XP_689275.5 Gene:wwc1 / 560785 ZFINID:ZDB-GENE-091118-8 Length:1112 Species:Danio rerio


Alignment Length:862 Identity:160/862 - (18%)
Similarity:282/862 - (32%) Gaps:290/862 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KMPPGWDCKYDQATGNCYYINYLTKAMQLEDPRGRSYRQLQNERCSTESIALQQL--VSQPQTSH 71
            ::|.||:..||...| .||:::.||:.||||||.:..|:        :.:.|...  |.|...|.
Zfish    54 ELPVGWEEAYDPHVG-AYYVDHNTKSTQLEDPRAQWQRE--------QELMLHDYLNVVQEALSA 109

  Fly    72 NSSPYHVHPSNNLTAIRAFQE---------RQQPTLHNISTS-----------PLLSASSRGHLE 116
            ....|.|.......|.:.:::         ..|.:|::.|:|           .:::|.||.: :
Zfish   110 QKEIYQVKEQRLRLAQQEYRQLNDAWRDKSSSQTSLNSRSSSSSKYDPEILKAEIVTAKSRVN-K 173

  Fly   117 MSSPLPFQRARVGPNLSRRSTIQETSFTTQAETDAVVTKIQNMFPTAGENHIRLLLKRYYNSEAV 181
            :...|.:.:..:        ..:|..|.|..|.|..|:...:.:             :.:.::|:
Zfish   174 LKRDLAYMKQEL--------HYKEQGFETLKEIDHKVSSASHGY-------------KLHEAQAI 217

  Fly   182 VVSALQVEKHPVTMPGPFVTPPSQRHLFHSGSAFYMTPPARRPDTVASRRTSRTASPLPGGRFGS 246
            :.....::                                   |.::|....:..      ....
Zfish   218 LKEVKSIK-----------------------------------DAISSGEKEKQE------LMRK 241

  Fly   247 LVSVQSGPGGPSGHQAVLPPSSAVPPALHGSPLWRSSPRPHSSPKMKLRYMKNIFPKADEELLLD 311
            |..::.|.....|.|:.|..|:   |:|..|.|  |.||.:|                |.|...|
Zfish   242 LAVLKDGFQLDYGSQSDLWASN---PSLANSNL--SLPRLYS----------------DAESQTD 285

  Fly   312 ILANADNNVQFASEKL-ISLGY--TKRDMQQPHRPNNRPPDLNQDQEAGGDQSGVHIPLRPKEYT 373
            |.|...::....:||: :||.|  .||.:     .|........|.||   ..|:..|.|.:...
Zfish   286 IPAQFVSSSNKLAEKVRLSLKYEEAKRRI-----ANIEVQIAKLDSEA---WPGLLDPERDRLIL 342

  Fly   374 EEEKTKMQTLLKE--------KYPQIAERIILMALESVNYAEDRATQILQIVQDED--------- 421
            ..||   :.||||        :.|..||:|     ||   .:.|..:.||..:|..         
Zfish   343 INEK---EELLKELQYVRPCKRAPNEAEKI-----ES---EKKRLEKDLQAARDNQSKALTERLR 396

  Fly   422 ---------EQREQKQAPMNPKHLDLKK--------TTGTEQIDGANEKDSLPAVVEPTTSS--- 466
                     ::.|:.....:..|..||.        ::|:.:....:.:.||......:|||   
Zfish   397 LHYRRNKLVKELEETVRVASSLHTQLKSLSASTLSCSSGSSRGSLTSSRGSLANSSLGSTSSLSF 461

  Fly   467 ------KPK---PPHKRHI------------LPSINVTT----------------PST-FTTQII 493
                  :|:   |..:..:            .||.::||                |.. ..||::
Zfish   462 TDVYLEQPELGDPDFQNKLDSILQEGSTSGYRPSSSITTIHENEVSSSSVQIGGGPGVGQRTQVL 526

  Fly   494 LAQATPTPTPTAEEMKLETHLSSISSASSSHSYASPPQSPRIFQQSY------------------ 540
            ....||             |..:..|..||.|..|||.||.:.:.|:                  
Zfish   527 RLSETP-------------HSMNSLSPRSSLSSLSPPCSPLVTEASFLSGEVFSGPASQLDLDLQ 578

  Fly   541 ERLTTKSILAKSGHNHFGHQSDTNNYSIDGYLHGSSNASSYSSYSASMTSSSLVSSAQSNSSSIA 605
            .||....:..........:| |....||.. :..|.:|.:.:..|...:..:.|:||.|:.|...
Zfish   579 TRLMELRLEEDQQQGQLNYQ-DNKQESIMA-VESSKDAVTQTRGSGPGSKKAGVTSAVSDESVAG 641

  Fly   606 ---------RRP--------AFESRARTKTDSLKHRQHSLGNSHNSESAEFQSIIERMASLGPNS 653
                     :||        ||:..:...:..:|     ||..:..:...|...:.::::.   |
Zfish   642 DSGVYEPSEKRPGLPVEQLLAFDDGSSASSAQIK-----LGLKYEVKEKRFTVFVMQLSNY---S 698

  Fly   654 QLSKGADENLLLADYVTWNGPNTKLLQK---QITQGP-----------NASLLTDRTYK------ 698
            .||..|::|:.:...|.......:.|.:   .:.|.|           :::.|..:|.:      
Zfish   699 ALSLPANQNIYVRVVVLPCSETVRCLFRTHCALPQEPVELKEAFSLQVSSTALRQKTLRIDVCTT 763

  Fly   699 PRGGKSELCKGPQSGLA 715
            .:.|:.....|.|..||
Zfish   764 SKSGREHCLAGAQISLA 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10508NP_001246859.1 CUE 291..327 CDD:270465 6/35 (17%)
wwc1XP_689275.5 WW 9..39 CDD:238122
WW 55..84 CDD:278809 13/29 (45%)
C2_Kibra 672..795 CDD:176062 20/117 (17%)
PHA03281 902..>1102 CDD:165538
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14791
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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