DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10508 and Wwc1

DIOPT Version :10

Sequence 1:NP_001246859.1 Gene:CG10508 / 40342 FlyBaseID:FBgn0037060 Length:733 Species:Drosophila melanogaster
Sequence 2:NP_001414291.1 Gene:Wwc1 / 303039 RGDID:1308329 Length:1108 Species:Rattus norvegicus


Alignment Length:674 Identity:120/674 - (17%)
Similarity:221/674 - (32%) Gaps:210/674 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KMPPGWDCKYDQATGNCYYINYLTKAMQLEDPRGRSYRQLQNERCSTESIALQQLVSQPQTSHNS 73
            ::|.||:..||...|: |:|::.||..|:||||      :|..|.....:....:|:|...|...
  Rat    54 ELPLGWEEAYDPQVGD-YFIDHNTKTTQIEDPR------VQWRREQEHMLKDYLVVAQEALSAQK 111

  Fly    74 SPYHVHPSNNLTAIRAFQERQQPTLHNISTSPLL----SASSRGHLE-MSSPLPFQRARVGP--- 130
            ..|.|.......|.:.:|:......|.:.:...|    |:||:...| :.:.:...::||..   
  Rat   112 EIYQVKQQRLELAQQEYQQLHAVWEHKLGSQVSLVSGSSSSSKYDPEILKAEIATAKSRVNKLKR 176

  Fly   131 ---NLSRRSTIQETSFTTQAETDAVVTKIQNMFP------------------TAGENHIRLLLKR 174
               :|......:|..|.|..:.|..::..|..:.                  |.||...:.|:| 
  Rat   177 EMVHLQHELQFKERGFQTLKKIDERMSDAQGGYKLDEAQAVLRETKAIKKAITCGEKEKQDLIK- 240

  Fly   175 YYNSEAVVVSALQVEKHPVTMPGPFVTPPSQRHLFHSGSAFYMTPPARRPDTVASRRTSRTASPL 239
               |.|::....:.::            .|...|:.|.|:.                 ..::.|:
  Rat   241 ---SLAMLKDGFRTDR------------GSHSDLWSSSSSL-----------------ESSSFPV 273

  Fly   240 PGGRFGSLVSVQSGPGGPSGHQAVLPPSSAVPPALHGSPLWRSSPRPHSSPKMKLRY-------- 296
            |                    :..|..||...  :.||....||.:.....:::|||        
  Rat   274 P--------------------KQFLDVSSQTD--ISGSFSTSSSNQLAEKVRLRLRYEEAKRRIA 316

  Fly   297 -MKNIFPKADEELLLDILANADNNVQFASEK---------LISLGYTKRDMQQPHRPNNRPPDLN 351
             :|....|.|.|....:|.:..:.:...:||         :....:|:.:::|......|   |.
  Rat   317 NLKIQLAKLDSEAWPGVLDSERDRLILINEKEELLKEMRFISPRKWTQGEVEQLEMARRR---LE 378

  Fly   352 QDQEAGGDQSGVHIPLRPKEYTE--------EEKTKMQTLLKEKYPQIAERIILM---------- 398
            :|.:|..|.....:..|.|..::        ||.|:....|..:...::..:..:          
  Rat   379 KDLQAARDTQSKALTERLKLNSKRNQLVRELEEATRQVAALHSQLKSLSSSMQSLSSGSSPGSLT 443

  Fly   399 ----ALESVNYAEDRATQILQIVQDEDEQREQKQAPMNPKHLDLKKTTG---------------- 443
                :|.:.:.....:.....:..|..||.: .:.|...:.|.|:..||                
  Rat   444 SSRGSLAASSLDSSTSASFTDLYYDPFEQLD-SELPSKVELLFLEGATGFRPSGCITTIHEDEVA 507

  Fly   444 -TEQIDGANEKDSLPAV---------VEPTTS-SKPKPPHKRHI----LPSINVTTPSTF-TTQI 492
             |::.:|.:...:|.::         :.|.:| |.|.||....|    |......||..| .|::
  Rat   508 KTQKAEGGSRLQALRSLSGTPRSMTSLSPRSSLSSPSPPCSPLIADPLLAGDAFLTPLEFEDTEL 572

  Fly   493 ILAQATPTPTPTAEEMKLET-------------------------------HLSSISSASSSHSY 526
                     :||..|:.|.|                               .::.:|:|.|..|.
  Rat   573 ---------SPTLCELSLGTDGARERFRLEEPGPEGKPLGQAASVAPGCGLKVACVSAAVSDESV 628

  Fly   527 ASPPQSPRIFQQSYERLTTKSILA 550
            |.   ...:::.|.:||.|....|
  Rat   629 AG---DSGVYEASMQRLGTSEAAA 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10508NP_001246859.1 CUE 291..327 CDD:270465 10/53 (19%)
Wwc1NP_001414291.1 WW 8..37 CDD:459800
WW 56..85 CDD:238122 13/29 (45%)
SMC_prok_B <162..>422 CDD:274008 51/317 (16%)
COG4913 <311..>422 CDD:443941 20/113 (18%)
C2_Kibra 661..784 CDD:176062
Blue background indicates that the domain is not in the aligned region.

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