DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment park and AT5G60250

DIOPT Version :9

Sequence 1:	NP_730600.1	Gene:	park / 40336	FlyBaseID:	FBgn0041100	Length:	482	Species:	Drosophila melanogaster
Sequence 2:	NP_200833.1	Gene:	AT5G60250 / 836147	AraportID:	AT5G60250	Length:	655	Species:	Arabidopsis thaliana

Alignment Length:	289	Identity:	62/289 - (21%)
Similarity:	96/289 - (33%)	Gaps:	85/289 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly   230 FKCAEHVSGGEKDFAAPLNLIKNNIKNV----------------PCLACTDVSDTVL-----VFP 273
            |...:||.....|......|.:.:|.::                .|..|  .:|.|.     |..
plant   256 FSSYQHVLVARNDVKFAYKLARESILSMVTPHEDPRQAKAVLKEECAIC--FNDIVAEGMFSVDK 318

  Fly   274 CASQHVTCIDCFRHYCRSRLGERQFMPHPDFGYTLPCP-AGCEHSFIEEIHHFKLLTREEYDRYQ 337
            |  :|..|..|.:.:...:|..         |....|| .||:...:.:... ||||.:....:|
plant   319 C--RHRFCFQCVKQHVEVKLLH---------GMAPKCPHDGCKSELVIDACG-KLLTPKLSKLWQ 371

  Fly   338 RFATEEYVLQAGGVLCPQPGCG---------------MGLLVEPDCRK-VTCQNGCGYVFCRNCL 386
            :...|..:.....|.||.|.|.               :.|..:...|: |.|:.    :||.:|.
plant   372 QRLQENAIPVTERVYCPYPRCSALMSKTKISESAKSLLSLYPKSGVRRCVECRG----LFCVDCK 432

  Fly   387 QGYHIGECLPEGTGASATNSC-EY-TVDPNRAAEARWDEASNVTIKVST-----KPCPKCRTPTE 444
            ..:|            ...|| || .:.|...|:       :|.:|...     :.|.||:...|
plant   433 VPWH------------GNLSCTEYKKLHPEPPAD-------DVKLKSLANNKMWRQCGKCQHMIE 478

  Fly   445 RDGGCMHMVCTRAGCGFEWCWVCQTEWTR 473
            ...||.|:.|.   ||.|:|:.|...|.:
plant   479 LSQGCNHITCR---CGHEFCYNCGGGWNK 504

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
park	NP_730600.1	UBQ	30..97	CDD:214563
		parkin_N	32..101	CDD:176393
		IBR	334..390	CDD:214763	14/71 (20%)
		IBR	<435..471	CDD:279784	13/35 (37%)
AT5G60250	NP_200833.1	RVT_3	155..279	CDD:372609	5/22 (23%)
		RING_Ubox	300..350	CDD:388418	14/62 (23%)
		IBR	368..441	CDD:214763	15/88 (17%)
		IBR	459..502	CDD:366672	14/45 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1140368at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920