DRSC/TRiP Functional Genomics Resources

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Protein Alignment park and AT2G19610

DIOPT Version :9

Sequence 1:NP_730600.1 Gene:park / 40336 FlyBaseID:FBgn0041100 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_973485.1 Gene:AT2G19610 / 816480 AraportID:AT2G19610 Length:418 Species:Arabidopsis thaliana


Alignment Length:437 Identity:94/437 - (21%)
Similarity:142/437 - (32%) Gaps:124/437 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 IQSATLEEEEPSLSDEASKPLNETLLDL-QLESEERL----------NITDEERVRAKAHFFV-- 161
            |:.|...::...:..|...||....||| .||:..|.          .:..||.::......|  
plant     9 IKDAITADDLKRVDQETQHPLLAQELDLDSLENPPRATTHTYRLYSKGLVSEELIKDDTMLVVGL 73

  Fly   162 HCSQCDKLCNGKLRVRCALCKGGAFTVHRDPEC-----------WDDVLKSRRIPGHCESLEV-A 214
            ..|.||.....|..:..|| :......|  ||.           |...|...||...|:...: |
plant    74 GLSLCDSHDYTKQEINKAL-RNQKLAAH--PEAAELAAIIHGLKWALELGIERIQFFCDDSNILA 135

  Fly   215 CVDNAAGDPPFAEFFFKCAEHVS--------------GGEKDFAAPLNLIKNNI----------- 254
            .|...|.  |......|..||||              ....|..:.:.|.|:.|           
plant   136 YVTRKAA--PNESIVAKLLEHVSLLQTRFTSCQALATVSRDDIVSVIKLAKDAIASQTRWCEGDT 198

  Fly   255 --KNVP-CLACTDVSDTVLVFPCASQHVTCIDCFRHYCRSR---LGERQFMPHPDFGYTLPCPAG 313
              ::.| |.|....:|...|..|.  |..|:.|.|....|.   .|.....|:||          
plant   199 EYESCPVCYAYVSPNDKFEVQGCF--HRICVTCMRKPFSSEQILRGNTAICPYPD---------- 251

  Fly   314 CEHSFI-EEIHHFK-------LLTREEYDRYQRFATEEYVLQAGGVLCPQPGCGMGLLVEPDCRK 370
            ||:..: |:...|.       ::.|::         |:.:.....|.||.|.|.. |:.:.|..:
plant   252 CENDLVPEDCRAFADADAITLMIQRKK---------EKAIPVKDRVYCPNPSCSF-LMSDLDLIR 306

  Fly   371 VTCQN-----------GCGYVFCRNCLQGYHIGECLPEGTGASATNSCEYTVDPNRAAEARW-DE 423
            ...:|           .||..||:.|...:|.                :.|.|..:.:|:.. .:
plant   307 HISKNPRHSEEARKCMECGLSFCKKCHVPWHY----------------KKTCDEFKKSESYLKSD 355

  Fly   424 ASNVTIKVST---KPCPKCRTPTERDGGCMHMVCTRAGCGFEWCWVC 467
            |:.:...|.|   |.|.:|::..:..|||..|.|..  |..|:|:.|
plant   356 AAILESFVKTQGWKKCSQCQSIVQHGGGCQQMTCRH--CKHEFCYTC 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parkNP_730600.1 UBQ 30..97 CDD:214563
parkin_N 32..101 CDD:176393
IBR 334..390 CDD:214763 14/66 (21%)
IBR <435..471 CDD:279784 11/33 (33%)
AT2G19610NP_973485.1 RNase_H_like 101..188 CDD:301345 19/88 (22%)
IBR 275..342 CDD:214763 16/92 (17%)
IBR 353..403 CDD:279784 15/50 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1140368at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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