DRSC/TRiP Functional Genomics Resources

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Protein Alignment park and Cul9

DIOPT Version :10

Sequence 1:NP_730600.1 Gene:park / 40336 FlyBaseID:FBgn0041100 Length:482 Species:Drosophila melanogaster
Sequence 2:XP_011245024.1 Gene:Cul9 / 78309 MGIID:1925559 Length:2580 Species:Mus musculus


Alignment Length:576 Identity:129/576 - (22%)
Similarity:196/576 - (34%) Gaps:168/576 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LQFGGKTL-THTLSIYVKTNTGKTLTVNLEPQWDIKNVKELVAPQLGLQPDDLKIIFAGKELSDA 82
            ||||.:|| ..|:.:::..|..::..|::|..  ::|..  ::|:|..|    .::....:....
Mouse  1807 LQFGDQTLHVSTVQMWLLLNFNQSEEVSVETL--LRNSD--LSPELLHQ----ALLPLTSDNGPL 1863

  Fly    83 TTIEQCDLGQQSVLHAIRLRPP-----------------VQRQKIQSATLEEEEPSLS------- 123
            |..|..|..|..||   |||.|                 :..:|.:..|||::...||       
Mouse  1864 TLEETQDYPQGGVL---RLREPRSQTHEEVLWLIPPQTYLSVEKDEGRTLEQKRNLLSCLLVRIL 1925

  Fly   124 -DEASKPLN-ETLLDLQLESEERLNITDEERVRAKAHFFVHCSQCDKLCNGKLRVRCAL-CKGGA 185
             ....|.|: :.|:.|.||:.:: ......|:...|...|.||..|.|       .|.| ..|..
Mouse  1926 KAHREKGLHIDQLVCLVLEAWQK-GPDPPGRLGNAAAVGVACSSTDVL-------SCILHLLGQG 1982

  Fly   186 FTVHRD-----------------------PECWDDVLKSRRIPGHCESLEVACVDNAAG------ 221
            :...||                       |.|.:...::.| |.....:.:|.:...||      
Mouse  1983 YVERRDDRPQVLMYATPEPMGPCRGQADVPFCGNKNTETSR-PSPEAVVALASLQLPAGRTMSPQ 2046

  Fly   222 -------------------DPPFAEFFFKCA----EHVSGGEKDFAAPLNLIKN----NIKNVP- 258
                               :|..|:.....:    |.:.....|...||.|...    ..:.|| 
Mouse  2047 EVEGLMEQTVRQVQETLNLEPDVAQHLLAHSHWGTEQLLQSYSDDPEPLLLAAGLRVPQAQVVPT 2111

  Fly   259 ----CLACT------DVSDTVLVFPCASQHVTCIDCFRHYCRSRLGERQFMPHPDFGYTLP---C 310
                |..|.      |.|.::....|.     |..|:..|..:|: |:.|:    ...|.|   |
Mouse  2112 RPDQCPVCVTPLGPHDDSPSLCCLHCC-----CKSCWNEYLTTRI-EQNFV----LNCTCPIADC 2166

  Fly   311 PAGCEHSFIEEIHHFKLLTREEYDRYQRFATEEYVLQAGGVL-CPQP-GCGMGLLVEPDCRK--- 370
            ||....:||..|    :.:.|...:|::.....||.....:. |..| ||...|     ||:   
Mouse  2167 PAQPTGAFIRNI----VSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRIL-----CRQGLG 2222

  Fly   371 --VTCQNGCGYVFCRNCLQGYHIGECLPEGTGASATNSCEYTVDPNRAAEARWDEA-SNVTIKVS 432
              .||.. ||:..|.:|        ..||....::.......||.....:....|| |....|:.
Mouse  2223 SGTTCSK-CGWASCFSC--------SFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKHLAKLI 2278

  Fly   433 TKPCPKCRTPTERDGGCMHMVCTRAGCGFEWCWVCQTEW------------TRDCM 476
            :|.||.|:.|.|::.||:||.|.|...||  ||.|...|            ..|||
Mouse  2279 SKRCPSCQAPIEKNEGCLHMTCARCNHGF--CWRCLKSWKPSHKDYYNCSAMEDCM 2332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parkNP_730600.1 Ubl_parkin 32..105 CDD:340496 17/89 (19%)
RING0_parkin 159..250 CDD:412057 23/143 (16%)
zf-RING_14 249..337 CDD:465601 23/105 (22%)
BRcat_RBR_parkin 322..398 CDD:439001 19/82 (23%)
Rcat_RBR_parkin 428..481 CDD:439018 22/61 (36%)
Cul9XP_011245024.1 Cul7 382..456 CDD:463286
APC10-like 1184..1314 CDD:382862
COG5647 <1736..1989 CDD:227934 47/200 (24%)
Cullin <1740..1857 CDD:459983 14/57 (25%)
RING_Ubox 2114..2166 CDD:473075 13/61 (21%)
BRcat_RBR_CUL9 2192..2265 CDD:439008 19/86 (22%)
Rcat_RBR_CUL9 2273..2328 CDD:439020 19/56 (34%)
Blue background indicates that the domain is not in the aligned region.

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