DRSC/TRiP Functional Genomics Resources

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Protein Alignment park and Rnf19b

DIOPT Version :10

Sequence 1:NP_730600.1 Gene:park / 40336 FlyBaseID:FBgn0041100 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001355692.1 Gene:Rnf19b / 75234 MGIID:1922484 Length:732 Species:Mus musculus


Alignment Length:261 Identity:70/261 - (26%)
Similarity:100/261 - (38%) Gaps:79/261 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 GGEKDFAAPLNLIKNNIKNVP-CLACTDVSDTVLVFPCASQHVTCIDCFRHYCRSRLGERQFMPH 301
            ||.::...||.|::...:..| .|:|              .|.:|.||.|||.|..:.|.: :| 
Mouse   109 GGAEEVECPLCLVRLPPERAPRLLSC--------------PHRSCRDCLRHYLRLEISESR-VP- 157

  Fly   302 PDFGYTLPCPAGCEHSFIEEIHHFKLLTREE--YDRYQRFATEEYVLQAGGV-LCPQPGCGMGLL 363
                  :.||...|..   ..|..:||..:.  ..:|:.|....|:...... .||.|.||..::
Mouse   158 ------ISCPECSERL---NPHDIRLLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVI 213

  Fly   364 VE--PDCRKVTCQ-NGCGYVFCRNCLQGYHIGECLPEGTGASATNSCEYTVDPNRAAE-ARWDEA 424
            ..  ..|.|:||: .||...||.:|.|.:|                      ||:..: ||...|
Mouse   214 AYGCASCPKLTCEREGCQTEFCYHCKQIWH----------------------PNQTCDMARQQRA 256

  Fly   425 SNVTIKVST------------------KPCPKCRTPTER--DGGCMHMVCTRAGCGFEWCWVCQT 469
            .  |::|.|                  ||||:|.....:  ||.|.||.|  |.||.|:||:|..
Mouse   257 Q--TLRVRTKHTSGLSYGQESGPADDIKPCPRCSAYIIKMNDGSCNHMTC--AVCGCEFCWLCMK 317

  Fly   470 E 470
            |
Mouse   318 E 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parkNP_730600.1 Ubl_parkin 32..105 CDD:340496
RING0_parkin 159..250 CDD:412057 4/11 (36%)
zf-RING_14 249..337 CDD:465601 20/90 (22%)
BRcat_RBR_parkin 322..398 CDD:439001 22/81 (27%)
Rcat_RBR_parkin 428..481 CDD:439018 22/63 (35%)
Rnf19bNP_001355692.1 Required for ubiquitin ligase activity and for protection against staurosporin-induced cell death. /evidence=ECO:0000250|UniProtKB:Q6ZMZ0 1..315 68/256 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..109 70/261 (27%)
TRIAD supradomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01221 112..334 68/258 (26%)
RING-HC_RBR_RNF19B 116..176 CDD:438432 21/84 (25%)
BRcat-RBR_RNF19B 181..255 CDD:439024 23/95 (24%)
Rcat_RBR_RNF19 278..346 CDD:439016 19/43 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..644
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 660..732
Blue background indicates that the domain is not in the aligned region.

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