DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment park and Rnf19a

DIOPT Version :10

Sequence 1:NP_730600.1 Gene:park / 40336 FlyBaseID:FBgn0041100 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_038951.1 Gene:Rnf19a / 30945 MGIID:1353623 Length:840 Species:Mus musculus


Alignment Length:322 Identity:77/322 - (23%)
Similarity:117/322 - (36%) Gaps:109/322 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 DDVLKSRRIPGHCESL-------EVACVD-------NAAGDPPFAEF------FFKCAEHVSGGE 240
            |...|||.:.|..:.:       ...|.|       |.:.|......      |.:|        
Mouse    76 DSKRKSRELNGGVDGIASIESIHSEMCADKNSIFSTNTSSDNGLTSISKQIGDFIEC-------- 132

  Fly   241 KDFAAPLNLIKNNIKNVP-CLACTDVSDTVLVFPCASQHVTCIDCFRHYCRSRLGERQFMPHPDF 304
                 ||.|::::....| .:.|              .|.:|:||.|.|.|..:.|.:       
Mouse   133 -----PLCLLRHSKDRFPDIMTC--------------HHRSCVDCLRQYLRIEISESR------- 171

  Fly   305 GYTLPCPAGCEHSFIEEIHHFKLLTREE--YDRYQRFATEEY-VLQAGGVLCPQPGCGMGLLVE- 365
             ..:.||. |...|  ..|..:|:..::  .::|:.|....: |.......||.|.||..::.. 
Mouse   172 -VNISCPE-CTERF--NPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFG 232

  Fly   366 -PDCRKVTC-QNGCGYVFCRNCLQGYHIGECLPEGTGASATNSCEYTVDPNRAAE-ARWDEASNV 427
             ..|.|:|| :.|||..||.:|.|.:|                      ||:..: ||.:.|.::
Mouse   233 CASCPKLTCGREGCGTEFCYHCKQIWH----------------------PNQTCDAARQERAQSL 275

  Fly   428 ---TIKVST--------------KPCPKCRTPTER--DGGCMHMVCTRAGCGFEWCWVCQTE 470
               ||:.|:              ||||:|.....:  ||.|.||.|  |.||.|:||:|..|
Mouse   276 RLRTIRSSSISYSQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTC--AVCGCEFCWLCMKE 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parkNP_730600.1 Ubl_parkin 32..105 CDD:340496
RING0_parkin 159..250 CDD:412057 13/73 (18%)
zf-RING_14 249..337 CDD:465601 17/90 (19%)
BRcat_RBR_parkin 322..398 CDD:439001 22/81 (27%)
Rcat_RBR_parkin 428..481 CDD:439018 22/59 (37%)
Rnf19aNP_038951.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..61
TRIAD supradomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU01221 128..351 68/270 (25%)
RING-HC_RBR_RNF19A 130..185 CDD:438431 18/92 (20%)
BRcat_RBR_RNF19A 191..273 CDD:439023 24/103 (23%)
Rcat_RBR_RNF19 295..363 CDD:439016 19/43 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 625..685
Interaction with CASR. /evidence=ECO:0000250 660..840
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 700..721
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 786..808
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.