DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment park and AT2G26135

DIOPT Version :9

Sequence 1:	NP_730600.1	Gene:	park / 40336	FlyBaseID:	FBgn0041100	Length:	482	Species:	Drosophila melanogaster
Sequence 2:	NP_973536.1	Gene:	AT2G26135 / 2745561	AraportID:	AT2G26135	Length:	384	Species:	Arabidopsis thaliana

Alignment Length:	277	Identity:	59/277 - (21%)
Similarity:	103/277 - (37%)	Gaps:	56/277 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   215 CVDN-------AAGDPPFAEFFFKCAEHVSGGEKDFAAPLNLIKNNIKNVPCL-----ACT---- 263
            |.||       .....|..|........|.|..|.|.:.:.:    :.:||.|     .||
plant    98 CCDNNQIFEWVMGRSTPQEENIAMLIRDVQGIRKQFTSSIAV----LIDVPALFHPKKTCTICFD 158

  Fly   264 -DVSDTVLVFPCASQHVTCIDCFRHYCRSRLGERQFMPHPDFGYTLPCPAGCEHSFIEEIHHFKL 327
             |::..::.:.....|:.|.:|.:.:....|.:         |..:.||:....|.:.......:
plant   159 DDINADMMFYIDQCGHMFCSECVKRHIEVSLLQ---------GSLITCPSYRCKSKLTYGSCVNI 214

  Fly   328 LTREEYDRYQRFATEEYVLQAGGVLCPQPGCGMGLLVEPDCRKVT----CQNGCGYVFCRNCLQG 388
            ||.:..:.:.:...|:.:.....|.||.|.|. .|:...:..::|    |...||..||..|...
plant   215 LTPKVKEMWIQRMGEDSIPVTDRVYCPNPTCS-ALMSVTELDQLTGSKRCCVKCGESFCIKCKVP 278

  Fly   389 YHIGECLPEGTGASATNSCE--YTVDPNRAA-EARWDEASNVTIKVSTKPCPKCRTPTERDGGCM 450
            :|            ...||:  ..:..||.. :.:.:|.:|   :.|.:.|.||:...|...||:
plant   279 WH------------DNLSCKRYKKLHSNRTTNDKQLNELAN---QESWRQCSKCKHMIELTQGCV 328

  Fly   451 HMVCTRAGCGFEWCWVC 467
            .::|.   ||.|:|:.|
plant   329 RVICR---CGHEFCYGC 342

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
park	NP_730600.1	UBQ	30..97	CDD:214563
		parkin_N	32..101	CDD:176393
		IBR	334..390	CDD:214763	14/59 (24%)
		IBR	<435..471	CDD:279784	12/33 (36%)
AT2G26135	NP_973536.1	RNase_H_like	73..>135	CDD:301345	9/36 (25%)
		IBR	221..285	CDD:214763	15/76 (20%)
		IBR	286..346	CDD:279784	17/63 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1140368at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920