DRSC/TRiP Functional Genomics Resources

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Protein Alignment park and C17H11.6

DIOPT Version :9

Sequence 1:NP_730600.1 Gene:park / 40336 FlyBaseID:FBgn0041100 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001123112.1 Gene:C17H11.6 / 181076 WormBaseID:WBGene00015926 Length:893 Species:Caenorhabditis elegans


Alignment Length:490 Identity:115/490 - (23%)
Similarity:167/490 - (34%) Gaps:175/490 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 EQCDLGQQSVLHAIRLRPPVQ-RQKIQ---SATLE---EEEPSLSDEASKPLNETLLDLQLESEE 143
            |:..:..|.:||.  ..|||| |:||.   |||..   ...||.|.|:|...|..          
 Worm    13 EEPSIESQPILHT--ATPPVQHRRKISEEVSATRPCQIRATPSKSTESSSVANVG---------- 65

  Fly   144 RLNITDEERVRAKAHFFVHCSQCDKLCNGKLRVRCALCKGG--AFTVHRDPECW---DD------ 197
              :|....|...|             |..:|.:...|...|  :|:..|....|   ||      
 Worm    66 --SIVANHRPSRK-------------CGSRLSLTSLLSFTGHSSFSRDRSRSGWSYSDDNAGHVA 115

  Fly   198 ---------------VLKSRRIPGHCESLEVACVDNAAGDPPFAEFFFKCAEHV----------S 237
                           .:.|:|..|   |...:.:|:.||:        .|||.:          .
 Worm   116 MTSVSSSDVRSNVSGSISSKRYRG---SDTGSGMDSEAGE--------TCAEMLLSSRNQDDEEQ 169

  Fly   238 GGEKDFAAPL-----------NLIKNNIKNVP-CLACTDVSDTVLVFP----CASQHVTCIDCFR 286
            ..||..:..|           ...|..:|..| |.|....|    .||    |  ||.:|..|.|
 Worm   170 SDEKQLSQSLPDTPKTPSEVGKKGKGKMKECPLCAAKMPGS----AFPKLKGC--QHRSCRACLR 228

  Fly   287 HYCRSRLGERQFMPHPDFGYTLPCPAGCEHSFIEEIHHFKLLTRE---EYDRYQRFATEEYVL-Q 347
            .|....:.|.:        ..:|||   |.|.....:..|:|..:   ..::|:.|:...|:: :
 Worm   229 QYVELSITENR--------VEVPCP---ECSSYLHPNDIKMLIGDIPTLIEKYEAFSLRRYLMTE 282

  Fly   348 AGGVLCPQPGCGMGLLVE--PDCRKVTCQN-GCGYVFCRNCLQGYHIGECLPEGTGASATNSCEY 409
            |....||.|.||...:..  ..|.::.||. .||.:||.:|.:.:|..:                
 Worm   283 ADARWCPAPDCGFVFIATKCAACPQLKCQRPDCGTLFCYHCKREWHSNQ---------------- 331

  Fly   410 TVDPNRAAEAR--------------WDEASNVTIKV-STKPCPKCRTPTER--DGGCMHMVCTRA 457
            |.|..|..|.|              :.::::.|:|. ..|.||:|:|...:  ||.|.|||||. 
 Worm   332 TCDEARRPEKRKSRGLAFEEIMRTGFHQSADSTLKPGDVKACPRCKTYIVKMDDGSCNHMVCTM- 395

  Fly   458 GCGFEWCWVCQTE-------------------WTR 473
             |..|:||:|..|                   |||
 Worm   396 -CNAEFCWLCLKEISDLHYLSPTGCTFWGKKPWTR 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parkNP_730600.1 UBQ 30..97 CDD:214563 2/10 (20%)
parkin_N 32..101 CDD:176393 4/14 (29%)
IBR 334..390 CDD:214763 17/59 (29%)
IBR <435..471 CDD:279784 18/56 (32%)
C17H11.6NP_001123112.1 IBR 268..333 CDD:214763 18/80 (23%)
IBR <369..407 CDD:279784 18/39 (46%)
AzlC <433..529 CDD:294385
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158565
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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