DRSC/TRiP Functional Genomics Resources

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Protein Alignment park and rnf217

DIOPT Version :9

Sequence 1:NP_730600.1 Gene:park / 40336 FlyBaseID:FBgn0041100 Length:482 Species:Drosophila melanogaster
Sequence 2:XP_004914658.1 Gene:rnf217 / 100379757 XenbaseID:XB-GENE-987824 Length:474 Species:Xenopus tropicalis


Alignment Length:425 Identity:89/425 - (20%)
Similarity:139/425 - (32%) Gaps:138/425 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 EEEEPSLSDEASK--PLNETLLDLQLESEERLNITDEERVRAKAHFFVH----CSQC-------D 167
            ||||.....|..:  |.::.:..:..:..|.....|.|..|..:...||    .:.|       |
 Frog    25 EEEEEDGGRERGQIPPASDRVSAIAYDDRELATSVDCEEHRVDSISAVHYEGPLASCYPDTPPSD 89

  Fly   168 KLCNGKLRVRCALCKGGAFTVHRDPECWDDVLKSRRIPGHCESL-EVACV--DNAAGDPP----- 224
            :      .:....|:.||.||.|........:|:|:   .|..| .|.||  |.::..||     
 Frog    90 R------DIEAVGCQPGAGTVSRAQGGGSIAVKTRK---RCSVLCTVYCVESDLSSDLPPLYHID 145

  Fly   225 ---FAEFFFKCAEHVSGGE---KDFAAPLNLIKNNIKNV---------PCLACTDVSDTVLVFPC 274
               ..|...:.:...|.||   ...:..|.|....|.||         .|..|.: ..::...||
 Frog   146 EGSLPELPTRASRLSSTGELALSPTSLELELSPILISNVGDSALKVMMSCRVCLE-DRSLKPLPC 209

  Fly   275 ASQHVTCIDCFRHYCRS--RLGERQF-------------------MPHPD---FGY--------- 306
            ..:.| |.:|.:.|..|  :||:.:.                   :||.|   :.|         
 Frog   210 CKKPV-CDECLKRYLSSQVQLGQAEIRCPITECNKHLDESTILYSLPHDDIIKYKYFLELSRVDS 273

  Fly   307 -TLPCPAGCEH--SFIEEIHHFKLLTREEYDRYQRFATEEYVLQAGGVLCPQPGCGMGLLVEPDC 368
             |.|||. |:|  :|..:.|...|...|...:.|               ||              
 Frog   274 STKPCPQ-CKHFTTFRSKTHIPNLTKSENKLKIQ---------------CP-------------- 308

  Fly   369 RKVTCQNGCGYVFCRNCLQGYHIGECLPEGTGASATNSCEYTVDPNRAAEARWDEASNVTI-KVS 432
                   .|.:::|..|...:|.|           .|..||.......  ..|  |:.:.. :.:
 Frog   309 -------SCQFIWCFKCHAPWHEG-----------VNCREYKKGDKLL--RHW--ANEIEHGQRN 351

  Fly   433 TKPCPKCRTPTERDGGCMHMVCTRAGCGFEWCWVC 467
            .:.||:|:...:|..||.||.|::  |...:|:.|
 Frog   352 AQKCPRCKVHIQRTEGCDHMTCSQ--CNTNFCYRC 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
parkNP_730600.1 UBQ 30..97 CDD:214563
parkin_N 32..101 CDD:176393
IBR 334..390 CDD:214763 6/55 (11%)
IBR <435..471 CDD:279784 12/33 (36%)
rnf217XP_004914658.1 vRING-HC-C4C4_RBR_RNF217 195..241 CDD:319536 11/47 (23%)
variant RING-HC finger (C4C4-type) 195..241 CDD:319536 11/47 (23%)
IBR 261..328 CDD:214763 19/114 (17%)
IBR <350..388 CDD:366672 12/37 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1140368at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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