Sequence 1: | NP_730600.1 | Gene: | park / 40336 | FlyBaseID: | FBgn0041100 | Length: | 482 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004914658.1 | Gene: | rnf217 / 100379757 | XenbaseID: | XB-GENE-987824 | Length: | 474 | Species: | Xenopus tropicalis |
Alignment Length: | 425 | Identity: | 89/425 - (20%) |
---|---|---|---|
Similarity: | 139/425 - (32%) | Gaps: | 138/425 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 116 EEEEPSLSDEASK--PLNETLLDLQLESEERLNITDEERVRAKAHFFVH----CSQC-------D 167
Fly 168 KLCNGKLRVRCALCKGGAFTVHRDPECWDDVLKSRRIPGHCESL-EVACV--DNAAGDPP----- 224
Fly 225 ---FAEFFFKCAEHVSGGE---KDFAAPLNLIKNNIKNV---------PCLACTDVSDTVLVFPC 274
Fly 275 ASQHVTCIDCFRHYCRS--RLGERQF-------------------MPHPD---FGY--------- 306
Fly 307 -TLPCPAGCEH--SFIEEIHHFKLLTREEYDRYQRFATEEYVLQAGGVLCPQPGCGMGLLVEPDC 368
Fly 369 RKVTCQNGCGYVFCRNCLQGYHIGECLPEGTGASATNSCEYTVDPNRAAEARWDEASNVTI-KVS 432
Fly 433 TKPCPKCRTPTERDGGCMHMVCTRAGCGFEWCWVC 467 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
park | NP_730600.1 | UBQ | 30..97 | CDD:214563 | |
parkin_N | 32..101 | CDD:176393 | |||
IBR | 334..390 | CDD:214763 | 6/55 (11%) | ||
IBR | <435..471 | CDD:279784 | 12/33 (36%) | ||
rnf217 | XP_004914658.1 | vRING-HC-C4C4_RBR_RNF217 | 195..241 | CDD:319536 | 11/47 (23%) |
variant RING-HC finger (C4C4-type) | 195..241 | CDD:319536 | 11/47 (23%) | ||
IBR | 261..328 | CDD:214763 | 19/114 (17%) | ||
IBR | <350..388 | CDD:366672 | 12/37 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1140368at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |