DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42337 and SWI1

DIOPT Version :9

Sequence 1:NP_001246858.1 Gene:CG42337 / 40335 FlyBaseID:FBgn0259239 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_015309.1 Gene:SWI1 / 856091 SGDID:S000005937 Length:1314 Species:Saccharomyces cerevisiae


Alignment Length:333 Identity:73/333 - (21%)
Similarity:125/333 - (37%) Gaps:101/333 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 ITDDISATSPVAADEVKPTAP----------------TSSQVAK--SAETNLQPDSAASLD-VPT 350
            |:.:.|:::|.......|.|.                ||:|:..  :|..::...|:||.: ||.
Yeast   213 ISQNSSSSTPNTNSNSTPNANQQFLPFNNSASNNGNLTSNQLISNYAASNSMDRSSSASNEFVPN 277

  Fly   351 TPQDTSGDPITEAADERPEHARQQQHPVTNNWSPTTRRPRTPPAPQNSPIG-----FGQNASVPP 410
            |..:.:        :....:.|...:..|:|.:..|..|...||..|:...     |.:.|    
Yeast   278 TSDNNN--------NSNNHNMRNNSNNKTSNNNNVTAVPAATPANTNNSTSNANTVFSERA---- 330

  Fly   411 ALAHLLQQQQQQQLQ-LQQQQQQQQVGNLKRCATSGKNRSSHNRIIECDLIPSKKSKRKSVKKQA 474
            |:...|||:|||:.| |||||||||            |:...|:..:......:..|....::|.
Yeast   331 AMFAALQQKQQQRFQALQQQQQQQQ------------NQQQQNQQPQQQQQQQQNPKFLQSQRQQ 383

  Fly   475 GEIENMEAVEPIVREQIRDIKPLPGFLQAFGSTEI-GRFSERFLQTPESLVERLAEEYAGSAPNN 538
            .:...::::.|.::|:|              |||: .:..|.|:   :||:|...:       .|
Yeast   384 QQRSILQSLNPALQEKI--------------STELNNKQYELFM---KSLIENCKK-------RN 424

  Fly   539 CPSHSAGGYIESPAMATHN---YYPYE-EQNQGGYPR-NRMRDYG-----YEIPDY--------- 584
            .|..|.      |.:....   :|.|. .|..||..: .|.:.:.     .:|.||         
Yeast   425 MPLQSI------PEIGNRKINLFYLYMLVQKFGGADQVTRTQQWSMVAQRLQISDYQQLESIYFR 483

  Fly   585 --MAYERY 590
              :.|||:
Yeast   484 ILLPYERH 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42337NP_001246858.1 None
SWI1NP_015309.1 ARID_Swi1p-like 407..490 CDD:350635 19/98 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2744
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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