Protein Alignment CG42337 and Arid4a

DIOPT Version :9

• Sequence 1: NP_001246858.1
• Gene: CG42337 / 40335
• FlyBaseID: FBgn0259239
• Length: 610
• Species: Drosophila melanogaster
• Sequence 2: XP_038968184.1
• Gene: Arid4a / 314205
• RGDID: 1307442
• Length: 1277
• Species: Rattus norvegicus
• Alignment Length: 625
• Identity: 109/625 - (17%)
• Similarity: 182/625 - (29%)
• Gaps: 215/625 - (34%)

  Fly   106 QQQQPHPQQSQPGYEPPPPL--------PYSSSASYQSRGFGAFAGPTPHYAPPGRSSTPAPNRT 162
            ::.:...::.|......|||        |||.|.:..|.|.................|:.:..
  Rat   672 EKDEKRDEERQKSKRGRPPLKSTFSSNMPYSLSKTSNSEGKSDSCSSDSEAEDQLEKSSVSEE-- 734

  Fly   163 VLPPSYLEPL-RSYSAEQQHLSQQQ----HLSQQQLQHHPLPGTP-----------------KLE 205
             |.|...|.| :|.:.....|:::.    |:|.:..:....|..|                 |:|
  Rat   735 -LSPDIKEELEKSENVHDDKLAEENPKTVHISNENDRTQAQPSEPLTVEAGDSDQIVHIFGDKVE 798

  Fly   206 DPDVEVEAVAESPAQR-------------LTTSPPMISATGTDSGISNCSTRARSDSSQSTPVYS 257
            ..:...:.|.:||..:             :..||......|::         ||.|:.
  Rat   799 QAEELKKQVEKSPKAKGRRNKTKDLSLELIKISPFSQEEAGSE---------ARGDTH------- 847

  Fly   258 GEYPVNMSVESASCVPYHCPADARD-YEEE---------EHQPPVTAEVRRADTPLDIT------ 306
                 ::...|..|..:....|..| ||:|         :|.|   .:..|.:..:::|
  Rat   848 -----SLEFSSLECKNFSSTEDDVDQYEKEKKLKRKILGQHSP---EKKLRLENGVEMTTGLSQE 904

  Fly   307 --DDISATSPV----------AADEVKPTAPTSSQVAKSAETNLQPDSAASLDVPTTPQDTSGDP 359
              ||.:....|          |..|..|:............|.::|||.|        ::.:..|
  Rat   905 RSDDSAVAEGVKGVHVEQRFEAEGEGMPSLIAEPDQGIQEPTGVKPDSPA--------EEPAHTP 961

  Fly   360 ITEAADERP------------------EHARQQQHPVTNNWSPTTRRPRTPP-----APQN---- 397
            :.|..|..|                  |..:.....|....|.:......||     |.||
  Rat   962 LKEEEDVMPLIGPETLVCHEVDLDDLDEKEKPSIEDVVIEGSESNSLGSVPPALPPVAQQNFSVA 1026

  Fly   398 SPIGFGQNASVPPALAHLLQQQQQQQLQLQQQQQQQQVGNLKRCATSGKNRSSHNRIIECDLI-- 460
            ||:...|:.|      ..::.:....:::....::.|.|..:|.:.:|...|..:.  .|.:|
  Rat  1027 SPLTLSQDES------RSIKSESDITIEVDSIAEESQEGLCERESANGFEASVTSG--ACGMIVH 1083

  Fly   461 -----------PS--------KKSKR---------KSVKKQAGEIENMEAVEPIVREQIRDIKPL 497
                       ||        ||.||         ||.|..||              |..|.:.|
  Rat  1084 ERESREKGQKRPSDANSGLMAKKQKRTPKRTSAAAKSEKNGAG--------------QSSDSEDL 1134

  Fly   498 PGFLQAFGSTEIGRFSERFLQTPESL---------------VERLAEEYAGSAP----------- 536
            |....:...|.:.|.|   |..|:.|               .|:..|::..|:|
  Rat  1135 PAMDSSSNCTPVKRLS---LPKPQKLPRSPARISPHIKDGEKEKHREKHPNSSPRTYKWSFQLNE 1196

  Fly   537 -NNCPSHSAGGYIESPAMATHNYYPYEEQNQGGYPRNRMR 575
             :|..|.....:::........||...:.......|.|.|
  Rat  1197 LDNMNSTERISFLQEKLQEIRKYYMSLKSEVATIDRRRKR 1236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42337	NP_001246858.1	None
Arid4a	XP_038968184.1	Tudor_ARID4A_rpt1	23..80	CDD:410530
		Tudor_SF	81..137	CDD:413384
		RBB1NT	189..281	CDD:400474
		ARID	331..416	CDD:355778
		CBD_RBP1_like	597..655	CDD:350843

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG2744
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900