DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42337 and ARID2

DIOPT Version :9

Sequence 1:NP_001246858.1 Gene:CG42337 / 40335 FlyBaseID:FBgn0259239 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_689854.2 Gene:ARID2 / 196528 HGNCID:18037 Length:1835 Species:Homo sapiens


Alignment Length:533 Identity:125/533 - (23%)
Similarity:173/533 - (32%) Gaps:164/533 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PTMSHYPPQPYRSGYTGYHTYGYGYGSSSSASYMPNYYRYAPYASPHYSQ----HHQGMFTPAGQ 84
            |...:|..||..:...       ...|....|..|     :|...||.||    |.|.  ||...
Human   607 PIQMYYQQQPVSTSVV-------RVDSVPDVSPAP-----SPAGIPHGSQTIGNHFQR--TPVAN 657

  Fly    85 QIIPSSVLHYPPRPHPYQ----------QLPQQQQPHPQQSQPGYEPPPPLPYSSSASYQSRGFG 139
            |   ||.|.......|.|          ::||...||..|.|..    |.....|.|        
Human   658 Q---SSNLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNA----PVTVIQSKA-------- 707

  Fly   140 AFAGPTP---HYAPPGRSSTPAPNRTVLPPSYL---EPLRSYSAEQQHLSQQQH---LSQQQLQH 195
                |.|   ..|...::|.|   :|.:|.|..   .|.:| |..|.|.:..|.   ::.|.|.|
Human   708 ----PIPCEVVKATVIQNSIP---QTGVPVSIAVGGGPPQS-SVVQNHSTGPQPVTVVNSQTLLH 764

  Fly   196 HP------------LPG-TPKLEDPDVEVEAVAES---------PA---------QRLTTSPPMI 229
            ||            :|| .|......|..:||.:|         ||         |.:||||..:
Human   765 HPSVIPQQSPLHTVVPGQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPV 829

  Fly   230 SATGTDSGISNCSTRARSDSSQSTPVYSGEYPVN--MSVESASCVPYHCPADARDYEEEEHQPPV 292
            ..       |:..|.|.|.|..:..:...:|...  .::.||:.|             :..|...
Human   830 QT-------SSQQTSAGSQSQDTVIIAPPQYVTTSASNIVSATSV-------------QNFQVAT 874

  Fly   293 TAEVRRADTPLDITDDIS----ATSPVAADEV----------KPTAPTS------SQVAKSAET- 336
            ...|..|..|......:.    |..|:.:.:|          :|..||.      ||.|:..:| 
Human   875 GQMVTIAGVPSPQASRVGFQNIAPKPLPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTY 939

  Fly   337 -----NLQPDSAASLDVPTTPQDTSGDPITEAADERPEHARQQQHPVTNNWSPTTRRPRTPPAPQ 396
                 .:...:.|:|....|.|.|....||.::...|.       |.|||..||.....:.|..|
Human   940 APAIHQIVLANPAALPAGQTVQLTGQPNITPSSSPSPV-------PATNNQVPTAMSSSSTPQSQ 997

  Fly   397 NSPIGFGQNASV-----------PPALAHLLQQQQQQQLQLQQQQQQQQVGNLKRCATSGKNRSS 450
            ..|....|..||           ||.....:|.||.||:|:|.|.||...|       .|:..|.
Human   998 GPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQQPQQVQMQVQPQQSNAG-------VGQPASG 1055

  Fly   451 HNRIIECDLIPSK 463
            .:.:|:..|:|.:
Human  1056 ESSLIKQLLLPKR 1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42337NP_001246858.1 None
ARID2NP_689854.2 ARID 19..101 CDD:279697
LXXLL 313..317
RFX_DNA_binding 521..601 CDD:280427
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 819..844 10/31 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 894..919 3/24 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 962..1057 31/108 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1266..1287
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1295..1314
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1321..1341
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1488..1522
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1572..1629
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1703..1728
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2744
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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