DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42337 and ARID3A

DIOPT Version :9

Sequence 1:NP_001246858.1 Gene:CG42337 / 40335 FlyBaseID:FBgn0259239 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_005215.1 Gene:ARID3A / 1820 HGNCID:3031 Length:593 Species:Homo sapiens


Alignment Length:485 Identity:92/485 - (18%)
Similarity:153/485 - (31%) Gaps:135/485 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 QQSQPGYEPPPPLPYSSSASY--QSRGFGAFAG------------PTPHYAPPGRSSTPAPNRTV 163
            ::.:.|..||.|....::|.:  :::...||.|            |.|..|.||.::..||.  :
Human   153 EEDEEGLGPPGPASLGTTALFPRKAQPPQAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQ--L 215

  Fly   164 LPPSYLEPLRSYSAEQQHLSQQQHLSQQQLQHHPLPGTPKLEDPDVEVEAVAE---SPAQRLTTS 225
            .||.:    ..::.|:|.         :||  :.|.|.||.::...::.:..:   :|..|:...
Human   216 QPPDH----GDWTYEEQF---------KQL--YELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIM 265

  Fly   226 PP------MISATGTDSG----ISNCSTRARSDSSQSTPVYSGEYPVNMSVESAS---------- 270
            ..      |:....|:.|    :.|...........:.|.         |:.||:          
Human   266 AKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNLPT---------SITSAAFTLRTQYMKY 321

  Fly   271 CVPYHCPADARDYEEEEHQPPVTAEVRRADTPLDITDDISATSPVAADEV--KPTAPTSSQVAKS 333
            ..||.|  :.|...............||..........:.|.||..|..:  .|..|.|| :..:
Human   322 LYPYEC--EKRGLSNPNELQAAIDSNRREGRRQSFGGSLFAYSPGGAHGMLSSPKLPVSS-LGLA 383

  Fly   334 AETNLQPDSAASLDVPTTPQDTSGDPITEAADERPEHARQQQHPVTNNWSPTTRRPRTPPAPQNS 398
            |.||                   |..||.|    |:..:::...:     |.|...|.|.:....
Human   384 ASTN-------------------GSSITPA----PKIKKEEDSAI-----PITVPGRLPVSLAGH 420

  Fly   399 PIGFGQNASVPPALAHLLQQQQQQQL-QLQQQQQQQQVGNLKRCATSGKNRSSHNRIIECDLIPS 462
            |:...|.|:|..|.|......|...| ||:::.:..:....|....:.:.:....|.::.:.:..
Human   421 PVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESAEPPEKKMALVADEQQRLMQRALQQNFLAM 485

  Fly   463 KKSKRKSVK--KQAGEIENMEAVEPIVREQIRDIKPLPGFLQAFGSTEIGRFSE---------RF 516
            ......|::  .||.|.....||.            |.|   ..||..|....|         .|
Human   486 AAQLPMSIRINSQASESRQDSAVN------------LTG---TNGSNSISMSVEINGIMYTGVLF 535

  Fly   517 LQTPESLVERLAEEYAGSAPNNCPSHSAGG 546
            .|.|            ...|.:.|:...||
Human   536 AQPP------------APTPTSAPNKGGGG 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42337NP_001246858.1 None
ARID3ANP_005215.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..222 17/74 (23%)
Acidic 119..156 0/2 (0%)
BRIGHT 239..331 CDD:128777 15/102 (15%)
Important for nuclear localization. /evidence=ECO:0000250 445..488 5/42 (12%)
Homodimerization 490..513 8/37 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 497..516 7/33 (21%)
Important for cytoplasmic localization. /evidence=ECO:0000250 537..557 6/29 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 539..593 5/27 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2744
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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