DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42337 and ARID5A

DIOPT Version :9

Sequence 1:NP_001246858.1 Gene:CG42337 / 40335 FlyBaseID:FBgn0259239 Length:610 Species:Drosophila melanogaster
Sequence 2:XP_016858672.1 Gene:ARID5A / 10865 HGNCID:17361 Length:657 Species:Homo sapiens


Alignment Length:590 Identity:113/590 - (19%)
Similarity:179/590 - (30%) Gaps:196/590 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 YHTYGYGYGSSSSASYMPNYYR--YAPYASPHYSQHHQGMFTPAGQQIIPSSVLHYPP------- 96
            |...|...||:|:|:....:|.  ..||.     :|.:|    ...:.:|:|    .|       
Human   178 YDELGGSPGSTSAATCTRRHYERLVLPYV-----RHLKG----EDDKPLPTS----KPRKQYKMA 229

  Fly    97 -----------RPHPYQQLPQQQQPHPQQSQPGYEPPPPLPYSSSASYQSRGFGAFAGPTPHYAP 150
                       ||...::..:..|..|.:::.....|.|||........:...|..:|.:..:. 
Human   230 KENRGDDGATERPKKAKEERRMDQMMPGKTKADAADPAPLPSQEPPRNSTEQQGLASGSSVSFV- 293

  Fly   151 PGRSSTPAPNRTVLPPSY-------LEPLRSYSAEQQHLSQQQHLSQQQLQHHPLPGTPKLEDPD 208
             |.|..|...:.:|...|       :.||    |:::.|:|...:...|.|..   |.....:|.
Human   294 -GASGCPEAYKRLLSSFYCKGTHGIMSPL----AKKKLLAQVSKVEALQCQEE---GCRHGAEPQ 350

  Fly   209 VEVEAVAESPAQRLTTSPPMISATGTDSGISNCSTRARSDSSQS--TPVYSGEYPVNMSVESASC 271
            .       |||..|..||.              |.:..:::|:.  ||....:.|.....|.|..
Human   351 A-------SPAVHLPESPQ--------------SPKGLTENSRHRLTPQEGLQAPGGSLREEAQA 394

  Fly   272 VPYHCPADARDYEEEEHQPPVTAEVRRADTPLDITDDISATSPVAADEVKPTAPTSSQVAKSAET 336
            .|  |||                        ..|......|.|  .:.:||.    ||..:...:
Human   395 GP--CPA------------------------APIFKGCFYTHP--TEVLKPV----SQHPRDFFS 427

  Fly   337 NLQ------PDSAASLDVPTTPQDTSGDPITEAADERPEHARQQQHPVTNN-W-SPTTR----RP 389
            .|:      |.....|.|........||....:|..:....:...:|.... | ||..:    .|
Human   428 RLKDGVLLGPPGKEGLSVKEPQLVWGGDANRPSAFHKGGSRKGILYPKPKACWVSPMAKVPAESP 492

  Fly   390 RTPPAPQNSPIGFGQNASV-PPALAHLLQQQQQQQLQLQQQQQQQQVGNLKRCATSGKNRSSHNR 453
            ..||...:|| |.|...|: ....||..::.:.....|::       .:.|:|..    :.:.:.
Human   493 TLPPTFPSSP-GLGSKRSLEEEGAAHSGKRLRAVSPFLKE-------ADAKKCGA----KPAGSG 545

  Fly   454 IIECDLIPSKKSKRKSVKKQAGEIENMEAVEPIVREQIRDIK---PL-----PGFLQA-----FG 505
            ::.|.|.|                    |:.|:..|..|...   ||     ||.|:.     |.
Human   546 LVSCLLGP--------------------ALGPVPPEAYRGTMLHCPLNFTGTPGPLKGQAALPFS 590

  Fly   506 STEIGRFSERFLQTPESLVERLAEEYAGSAP-------------------NNCPSHSAGGYIESP 551
            ...|..|...||.|            ||.:|                   ..||:.||.   .:|
Human   591 PLVIPAFPAHFLAT------------AGPSPMAAGLMHFPPTSFDSALRHRLCPASSAW---HAP 640

  Fly   552 AMATH 556
            .:.|:
Human   641 PVTTY 645



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2744
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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