DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42337 and ARID3B

DIOPT Version :9

Sequence 1:NP_001246858.1 Gene:CG42337 / 40335 FlyBaseID:FBgn0259239 Length:610 Species:Drosophila melanogaster
Sequence 2:NP_001294868.1 Gene:ARID3B / 10620 HGNCID:14350 Length:561 Species:Homo sapiens


Alignment Length:445 Identity:92/445 - (20%)
Similarity:144/445 - (32%) Gaps:159/445 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 LEPLRSYSAEQQHLSQQQHLSQQQLQHHPLPGTPKLEDPDVEVEAVAESP---AQRLTTSPPMIS 230
            :|||:....:||...:|.||:..|:......|           :.:.|:.   ||:|.|.|.::|
Human     1 MEPLQQQQQQQQQQQKQPHLAPLQMDAREKQG-----------QQMREAQFLYAQKLVTQPTLLS 54

  Fly   231 AT-GTDSGISNCSTRARSDSSQSTPVYSGEYPVNMSVESASCVPYHCPADARDYEEEEHQPPVTA 294
            || |..||              |||:                                       
Human    55 ATAGRPSG--------------STPL--------------------------------------- 66

  Fly   295 EVRRADTPLDITDDISATSPVAADEVKPTAPTSSQVAKSAETNLQPDSA-ASLDVPTTPQDTSG- 357
                              .|:|  .|.|||.. :||.:....|.:|:.. ..|      :|..| 
Human    67 ------------------GPLA--RVPPTAAV-AQVFERGNMNSEPEEEDGGL------EDEDGD 104

  Fly   358 DPITEAADERPEHARQ--------QQHPVTNNWSPTTRRPRTPPAPQNSPIGFGQNAS-VPPALA 413
            |.:.|.|::..:.|.:        :|.|.....|.....|..||..|.:.....::|| ..|:::
Human   105 DEVAEVAEKETQAASKYFHVQKVARQDPRVAPMSNLLPAPGLPPHGQQAKEDHTKDASKASPSVS 169

  Fly   414 HLLQQQQQQQLQLQQQQQQQQVGNL--KRCATSGKNRS---SHNRIIECDLIPSKKSKRKS---- 469
            ...|.......||:|.      |.|  ...|..|:.|.   ...::.|.|..|.:|.....    
Human   170 TAGQPNWNLDEQLKQN------GGLAWSDDADGGRGREISRDFAKLYELDGDPERKEFLDDLFVF 228

  Fly   470 VKKQAGEIENMEAVEPIVREQIRDIKPL------PGFLQAFGSTEIGRFSERFLQTPESLVERL- 527
            ::|:...|..:    ||:.:||.|:..|      .|.|....:.:|.|...:.|..|.|:.... 
Human   229 MQKRGTPINRI----PIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAF 289

  Fly   528 --------------AEEYAGSAP-------------NNCPSHSAGGYIESPAMAT 555
                          .|:.|.|:|             ...||:|:..:..|||.||
Human   290 TLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAAAT 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42337NP_001246858.1 None
ARID3BNP_001294868.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 10/45 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..122 26/148 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..179 9/42 (21%)
Interaction with RB1. /evidence=ECO:0000269|PubMed:10446990 203..365 31/146 (21%)
BRIGHT 216..305 CDD:128777 17/92 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..397
Interaction with ARID3A. /evidence=ECO:0000269|PubMed:17400556 490..513
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 523..561
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2744
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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