DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42337 and arid5b

DIOPT Version :9

Sequence 1:NP_001246858.1 Gene:CG42337 / 40335 FlyBaseID:FBgn0259239 Length:610 Species:Drosophila melanogaster
Sequence 2:XP_017214107.1 Gene:arid5b / 100536827 ZFINID:ZDB-GENE-121214-272 Length:1079 Species:Danio rerio


Alignment Length:605 Identity:121/605 - (20%)
Similarity:202/605 - (33%) Gaps:152/605 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRYPASFYDQHHSHHHPQHLTPTMSHYPPQPYRSGYTGYHTYGYGYGSSSSASYMPNYYRYAPYA 67
            |.:|.:....||.|..|.      ||...| ::.|...|             ...|:.......:
Zfish   470 DAFPVAAVPLHHGHPLPN------SHTSDQ-WKHGILEY-------------KVPPSALANVEQS 514

  Fly    68 SPHYSQHHQGMFTPAGQQ-------IIPSSV--------------LHYPPRPHPYQQLP-QQQQP 110
            .|...|:...|..|..||       |.|..|              |.| ||.:|....| .:::.
Zfish   515 RPKEGQNQVVMVLPTLQQKPVTSPEIPPERVEPLKKEESCFNFNPLLY-PRGNPGIMSPLAKKKM 578

  Fly   111 HPQQSQPG------YEPPPPL---PYSSSASYQSRGFGAFAGPTPHYAPPGRSSTPAPNRTVLPP 166
            ..|.|..|      |.|||||   ..|||.:..|.     ||.:....    ||:...:..:..|
Zfish   579 LSQVSGTGLLNNYPYGPPPPLVSRRLSSSGTEVSS-----AGQSSSQV----SSSVETSIVIKRP 634

  Fly   167 SYLEPLRSYSA-------EQQHLSQQQHLSQQQLQHH--PLPGTPKLE--DPDVEVEAVAESPAQ 220
            |.::..:|:.:       .....||:...|:.:..||  .|...|.|:  ||...:|..||.|  
Zfish   635 SVIQHAQSFKSRGSEDRRSSTEGSQKDGCSEGEPVHHSQTLIREPYLKRVDPHSSMEKSAEMP-- 697

  Fly   221 RLTTSPPMISATGTDSGISNCSTRAR--------------------SDSSQSTPVYSGEYPVNMS 265
            |...:|..:|...:...:.|...:..                    |:::|..|  ..::|.|:.
Zfish   698 RPGQAPSFLSEFYSSPHLHNLCRQTEHHLSKEQISKYLSRDVYTRDSETAQGFP--PSQHPDNVG 760

  Fly   266 VESASCVPYHCPADARDYEEEEHQPP--VTAEVRRADTPLDITDDISATSPVAADEVKPTAPTSS 328
            :..:          ||..::|:..||  ||.|     .|.|::  :..:||:       ..|.|:
Zfish   761 LNFS----------ARLSQKEKGPPPERVTEE-----QPTDLS--LPKSSPL-------KLPLST 801

  Fly   329 QVAKSAETNLQPDSAASLDVPTTPQDTSGDPITEAADERPEHAR------QQQHPVTNNWSPTTR 387
            ......     |.:|...|:..:|...:|:..:.:.|..|...|      .....||.:.|....
Zfish   802 STLGGI-----PHAAIQQDIKNSPHFQAGNSQSSSVDYHPRACRVPPMTVSASKKVTESHSKVLE 861

  Fly   388 RPRTPPAPQNSPIGFGQNASVPPALAHLLQQQQQQQLQLQQQQQQQQVGNLKRCATSGKNRSSHN 452
              :||.:.....:||..:....|    :|..:...|.....:..::.:.:|:...|..|.|:.  
Zfish   862 --KTPNSRGEESMGFKIDEMSRP----ILSTKSSPQNICTARPLKRNIEDLENGPTEKKIRAV-- 918

  Fly   453 RIIECDL---IPSKKSKRKSVKKQAGEIENMEAVEPIV--REQIRDIKPLPGFLQAFGSTEIGRF 512
            ..:.|..   :|.|.      :....:.|:::..||.|  .....:...:|.....|.....|.|
Zfish   919 TPLHCSTQRDLPGKP------RTPEADSESVKPAEPAVHINSYTSEGHKIPLHSHLFQGLYPGTF 977

  Fly   513 SERFLQTPESLVERLAEEYA 532
            ..:.....|||...:...|:
Zfish   978 VSQVQDMCESLGSHVTPSYS 997



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2744
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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