DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ac78C and phlp-2

DIOPT Version :9

Sequence 1:NP_001262138.1 Gene:Ac78C / 40333 FlyBaseID:FBgn0024150 Length:1727 Species:Drosophila melanogaster
Sequence 2:NP_001337270.1 Gene:phlp-2 / 185690 WormBaseID:WBGene00009647 Length:1126 Species:Caenorhabditis elegans


Alignment Length:1060 Identity:203/1060 - (19%)
Similarity:356/1060 - (33%) Gaps:362/1060 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   902 VQLRPRNG---ACSIQNLA----EAIDGKGLIIEDESTTDWIPEIPFKNLNSPEDGLNRADSILV 959
            ::|:.:|.   |..|:|:.    |:..|:.|.::|:   |....|.|:..|..|..|.||..:  
 Worm   168 IRLQTKNNQDEALQIRNMKVDVHESKRGRALRLKDD---DVCYLIIFQRPNILEAWLTRAQQV-- 227

  Fly   960 DTKEDHRVSVAVLDEEIDEFIEQNIQINSNKEIRREYLN---------PWTLKFKDKSQEQKFCQ 1015
             .|.:|   |...||::....||.:    |.|.|.:.||         |.|        |:....
 Worm   228 -EKSNH---VDASDEQLTLIPEQIL----NNEARVQILNLRRNSLISRPPT--------EKSMAP 276

  Fly  1016 LR--EDMFRSNMLCVFVIWIFMVL---CQVIIIPRCTRLIICLSVGTVILTFCCVL--------- 1066
            |.  :|::|.:.|.|..:....:|   .|:.::....:|.:..:..:.:.:.|..:         
 Worm   277 LGYIDDLYRVHSLQVIDLSANQILSFPIQLTLLSHLRQLNLSSNYISSVPSECSNMRRLQYLNLS 341

  Fly  1067 ---------------------VMAEEFPGLPRCL-----------KTNSAKL--VHQRQ------ 1091
                                 :...:|..:|.||           ..|..|:  |.:.|      
 Worm   342 NNQLDTLPDSISELQNLQSLDISFNQFSQIPPCLFHLTLEMWRLAGNNIEKIDRVGEMQIQKIDL 406

  Fly  1092 RRTLFICGVIVSMCMLSAIGLVLCPSSTYIGTAD-EHSRFLRMVS----PYSNISMTEKEFKLNV 1151
            ||.:......:.:..::.:.|   ..::.|.|.. .:.|||:::.    ..|::.:: .|...:|
 Worm   407 RRNVLDTSFRLDIENITHLDL---RDNSMISTVHLTNLRFLKVIHCERLQLSSLHLS-GESLTHV 467

  Fly  1152 YLSATIHHNITISTPASGGPTP---------------LVDITSSGPSDEFVRSTLNALTLNLTPP 1201
            |..    ||:..|....  |.|               |.|..|..|:..|:|:..|:|.     .
 Worm   468 YAD----HNLLDSLVVM--PLPQNLQTLSLSFNHFRNLPDWISDCPNLTFLRANNNSLV-----A 521

  Fly  1202 LPQSHRPYTLTTNGHSVSLSNLSYSDA--SVMQSSSDVE-----GQCAHPEYLVFTWVLCLVSLA 1259
            ||:                 .:.||.:  |:....:::|     |:    |..:.|.:|....|:
 Worm   522 LPE-----------------RIFYSQSLRSIFAFINEIEHIPDFGE----ENCLETLILYKNKLS 565

  Fly  1260 TALKLYYLVKALMALAMVAFYTTLI-MMKFGSGDSFSLVELSRL--------GMPLGVQMLILLI 1315
            :..|.::.:  |..|..:...:..| ::.:..|.||..:::.|.        .:|:.|.|..|.|
 Worm   566 SLPKHFFSI--LPRLRQLNISSNFIELLPYFDGSSFCRLQILRCANNYLTENSVPVIVNMKHLKI 628

  Fly  1316 SFLVMVCYHARL----VEVTSRLDFIWKEQAERELTNMKSNR--ALNDTLIKNILP--------- 1365
            ..|    .|.||    ....|.|:.:       |..|:.|||  .|.|.|.  :||         
 Worm   629 IDL----SHNRLNSFDDSALSSLELL-------EDLNLSSNRLTRLADCLA--LLPCLQVLRAHS 680

  Fly  1366 ---DHVATYYLSDE-HTDELYSKMHNLCGVMFASIPNFQDF----YSEDID-------------- 1408
               .||..:..|:: ||.::.|...:|..:.|.:.||.:.|    .|.|.|              
 Worm   681 NQLVHVPEFRASNQLHTIDVSSNNISLGTLQFKAPPNLRHFDVTCNSGDFDTENFPENAKMHSKM 745

  Fly  1409 -------------------------NGKACIR-----------------ILNEIICDF-DELLEE 1430
                                     ..|.|||                 .::..||.| ...|:|
 Worm   746 NTINISEGSQNLFGFQIGVSGSRGMKNKQCIRQVRVENTFGFIDGGSNSYMSSSICRFMTSYLKE 810

  Fly  1431 PRFASVEKI------------KTVGATYMAAAGLNHEHLRLRGETSEDSVCDLVEFAFAMKQKLE 1483
            .....:..|            :.:||:.|.        :|:..:..|.:....:..|.|..|||:
 Worm   811 NVSMDIRSILLRCHCELGEEGERLGASVMI--------IRVHEKRLEIASTGTMSAAIARNQKLK 867

  Fly  1484 -------EINGDAFNNFQLRVG-ICSGPLVSGVIGARK------------PVYD----------- 1517
                   ||:.|.::..:...| :.....::||||:.:            |.:.           
 Worm   868 MIINGRYEIDDDEYSRIREAHGFVDEENRINGVIGSSRQIGHFSTFPVVLPTHSYRNIQLNEQIE 932

  Fly  1518 --IWGNTV--NVAS--RMDSTGENWR--VQVPENTAELLCSRGYTCVKRGEIAVKGKGMMTTFYV 1574
              |.||.:  |:.|  .::||..|.|  :.|.:...:.|.|..|.......:..:.|..| ||..
 Worm   933 GLIVGNNMIWNMLSIDDLNSTFHNNRSPIVVAKKIQDQLQSYDYGGNSNILVLRRIKPQM-TFNG 996

  Fly  1575 HPKGISESQLISPVRMP-------AGIPLAQTPNLQRQTSHHGSFSAVVFGMLQASKRSTAIAGT 1632
            .....:::|:...:.:|       ..:|....|      .:|.|                    .
 Worm   997 FSTSSTKNQVTPDIAIPKIDEQLVLAVPALILP------EYHPS--------------------P 1035

  Fly  1633 PTGTPSPQIRRGHRGSTFSSVRLSQKSTTVNPVRRNTTRVRGRSYRQKKSSSNNSIVT----QAS 1693
            |...|.|.||  ||  |.|.......|:|..||......:   :.||..:.|....::    .:|
 Worm  1036 PVPPPIPAIR--HR--TPSPPPPPLPSSTPPPVSSEHEEI---NVRQSSTLSGGYTLSIDRFYSS 1093

  Fly  1694 SSYMPSFRRIDQIETTISKS 1713
            ||.:.|.::.::....:|||
 Worm  1094 SSTVSSRKQFNETRDLLSKS 1113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ac78CNP_001262138.1 AC_N <288..551 CDD:292831
CYCc 526..729 CDD:214485
Guanylate_cyc 566..753 CDD:278633
DUF1053 929..1020 CDD:283888 25/101 (25%)
CYCc 1353..1554 CDD:214485 61/327 (19%)
Guanylate_cyc 1381..1576 CDD:278633 55/306 (18%)
phlp-2NP_001337270.1 leucine-rich repeat 232..253 CDD:275380 8/27 (30%)
leucine-rich repeat 254..288 CDD:275380 8/41 (20%)
PLN00113 283..>718 CDD:331614 89/485 (18%)
leucine-rich repeat 289..311 CDD:275380 4/21 (19%)
leucine-rich repeat 312..334 CDD:275380 2/21 (10%)
leucine-rich repeat 335..357 CDD:275380 0/21 (0%)
leucine-rich repeat 358..379 CDD:275380 4/20 (20%)
leucine-rich repeat 380..440 CDD:275380 9/62 (15%)
leucine-rich repeat 441..485 CDD:275380 12/50 (24%)
leucine-rich repeat 486..508 CDD:275380 3/21 (14%)
leucine-rich repeat 509..534 CDD:275380 8/46 (17%)
leucine-rich repeat 554..577 CDD:275380 5/24 (21%)
leucine-rich repeat 578..602 CDD:275380 5/23 (22%)
leucine-rich repeat 603..625 CDD:275380 4/21 (19%)
leucine-rich repeat 626..649 CDD:275380 8/26 (31%)
leucine-rich repeat 650..672 CDD:275380 9/30 (30%)
leucine-rich repeat 673..694 CDD:275380 3/20 (15%)
PP2Cc 754..985 CDD:214625 42/238 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.