DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ac78C and odr-1

DIOPT Version :9

Sequence 1:NP_001262138.1 Gene:Ac78C / 40333 FlyBaseID:FBgn0024150 Length:1727 Species:Drosophila melanogaster
Sequence 2:NP_001362115.1 Gene:odr-1 / 181479 WormBaseID:WBGene00003848 Length:1047 Species:Caenorhabditis elegans


Alignment Length:304 Identity:84/304 - (27%)
Similarity:139/304 - (45%) Gaps:61/304 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1327 LVEVTSRLDFIWKEQAEREL---------TNMKSNRALNDTL-------IKN--ILPDHVATYYL 1373
            ||:...|:...:.::.|:.:         ..|::.|.||:.|       :||  |:|        
 Worm   775 LVDQMIRMSEKYADELEQMVAIRTADLADAQMQTMRLLNEMLPASIAKDLKNGLIMP-------- 831

  Fly  1374 SDEHTDELYSKMHNLCGVMFASIPNFQDFYSEDIDNGKACIRILNEIICDFDELLEEPRFASVEK 1438
                     .:.:....|||..|.:|......  .:.:..|..||:|...||.:::.   ....|
 Worm   832 ---------PRSYESATVMFVQICDFNALMKR--SSPEQVIAFLNDIYDQFDTVIKR---HDAYK 882

  Fly  1439 IKTVGATYMAAAGLNHE----HLRLRGETSEDSVCDLVEFAFAMKQKLEEINGDAFNNFQLRVGI 1499
            ::|.|.|||.|:|:.||    |:   .|.:|.|: ::.|.::     :..:..|.....::|:|.
 Worm   883 VETTGETYMVASGVPHENEGRHI---FEVAEISL-EIREISY-----IYVLQHDKNYKLRIRIGF 938

  Fly  1500 CSGPLVSGVIGARKPVYDIWGNTVNVASRMDSTGENWRVQVPENTAELLC-SRGYTCVKRGEIAV 1563
            .:||:.:||||.|.|.|.::|:|||.||||.|.....::|..|.||.||. |..|..||||.:.|
 Worm   939 HAGPIAAGVIGIRSPRYCLFGDTVNFASRMQSNCPPNQIQTSEITARLLFDSHEYKFVKRGIVHV 1003

  Fly  1564 KGKGMMTTFYVHPKGISESQLISPVRMPAGIPLAQTPNLQRQTS 1607
            ||||.:..::::.....|::       |...|:...||..|:.|
 Worm  1004 KGKGEVNCYWLNEHLHEETE-------PPLPPMTPVPNPLRRGS 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ac78CNP_001262138.1 AC_N <288..551 CDD:292831
CYCc 526..729 CDD:214485
Guanylate_cyc 566..753 CDD:278633
DUF1053 929..1020 CDD:283888
CYCc 1353..1554 CDD:214485 62/214 (29%)
Guanylate_cyc 1381..1576 CDD:278633 64/199 (32%)
odr-1NP_001362115.1 Periplasmic_Binding_Protein_type1 63..378 CDD:385651
PK_GC 495..768 CDD:270894
CYCc 803..996 CDD:214485 64/223 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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