Sequence 1: | XP_021335251.1 | Gene: | cacna1da / 403310 | ZFINID: | ZDB-GENE-030616-135 | Length: | 2093 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
Alignment Length: | 2069 | Identity: | 477/2069 - (23%) |
---|---|---|---|
Similarity: | 835/2069 - (40%) | Gaps: | 653/2069 - (31%) |
- Green bases have known domain annotations that are detailed below.
Zfish 6 PAPPAATPAAPP-AAAVPVPSVVPVGS------LAQKKR--AQYAKSKKQGSSANTRPQRALFCL 61
Zfish 62 NLNNPIRRACISLVEWKPFDIFILIAIFANCMALAVYVPFPEDDSNSTNHDLETVEYAFLIIFTI 126
Zfish 127 ETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIGLFSVVLEVLTKEGGEKEEVGENLSAHGHGGK 191
Zfish 192 PGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIG 256
Zfish 257 KMHASCY----FQG-----TD-------------ILEDE----PAPCAVNGHGRTCPINGTLCKE 295
Zfish 296 GW-QGPNGGITNFDNFMFAMLTVFQCITMEGWTDVLYWMNDAMGLELPW--VYFVSLVIFGSFFV 357
Zfish 358 LNLVLGVLSGEFSKEREKAKAR--GDFQKLREKQQ--------LEEDLK---------------- 396
Zfish 397 --------------GYLDWITQAEDIDPENEEE--------EEES-----------------KRN 422
Zfish 423 RVTLASL--------------MEKK---KKGFGWFS----------------------QSSDTHA 448
Zfish 449 SMPASE--------------------------------------------------TESMNTENE 463
Zfish 464 KGEDEKATCCGPTCQKISKSKFSRRWRRWNRLCR------------------------------- 497
Zfish 498 ---------RNCRLAVKSVPFY-------------------------------------WL---- 512
Zfish 513 -VIILVF-------------LNTLTISSEHYNQPMWLTQVQDVANKVLLAMFTCEMLVKMYSLGL 563
Zfish 564 QAYFVSLFNRFDCFVVCGGITETILVEFEIMSPLGISVFRCVRLLRIFKVTRHWASLSNLVASLL 628
Zfish 629 NSMKSIASLLLLLFLFIIIFSLLGMQVFGGKFN-----FDETQTKRSTFDNFPQALLTVFQILTG 688
Zfish 689 EDWNAVMYDGIMAYGGPSSSGMIVCI-YFIILFICGNYILLNVFLAIAVDNLADAESLNT----D 748
Zfish 749 DTKKPDEI--------------------------------------------------------- 756
Zfish 757 ------------DEI-------------------------------------------------- 759
Zfish 760 ---------------EDEAKAGE------EDEKDNAEED-------EEEPDVPAGPRPKISELV- 795
Zfish 796 ---------------------KKEKITPIPEGSAFFIFSNTNPVRVACHKLINHHIFTNLILVFI 839
Zfish 840 MLSSASLAAEDPIRNFSARNI---ILGYFDYAFTAIFTVEIVLKMTTYGAFLH-KGAFCRNYFNL 900
Zfish 901 LDLLVVGVSLVSFG---IQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIM 962
Zfish 963 IVTTLLQFMFACIGVQLFKGKFYRCNDEAKSSPEECKGTYIMYKEGDVNQPIIQKRH-------- 1019
Zfish 1020 WHNSDFNFDNVLMAMMALFTVSTFEGWPALLYKAIDSNRENMGPIYNYRVEISIFFIIYIIIIAF 1084
Zfish 1085 FMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEY----------ALKARPLRRYIPKNPYQY 1139
Zfish 1140 KFWYVVNSTGFEYIMFVLILLNTICLAVQHYGQSELFNYVMDILNMVFTAVFTVEMVLKLIAFKP 1204
Zfish 1205 RHYFTDAWNTFDALIVVGSVVDIAITEVNPTEAPQVDESGNTEDSARISITFFRLFRVM---RLV 1266
Zfish 1267 KLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDHTQINRNNNFQTF 1331
Zfish 1332 PQAVLLLFRCATGEAWQEIMLACMPGKLCDPESDYNPGEEMTCGSSFAIIYFITFYMLCAFLI-I 1395
Zfish 1396 NLFVAVIMDNFDYLTRD-WSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGK 1459
Zfish 1460 LCPHRVACKRLVAMNMPLNSDGTVMFNATLF-ALVRTALKIKTEGN-LEQANE--ELRA------ 1514
Zfish 1515 ---VIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEG 1565 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cacna1da | XP_021335251.1 | Ion_trans | 77..377 | CDD:306908 | 85/328 (26%) |
Ion_trans | 509..744 | CDD:306908 | 71/295 (24%) | ||
Ion_trans | 828..1105 | CDD:306908 | 99/291 (34%) | ||
Ion_trans | 1150..1414 | CDD:306908 | 86/268 (32%) | ||
GPHH | 1415..1485 | CDD:318993 | 17/69 (25%) | ||
Ca_chan_IQ | 1487..1558 | CDD:312334 | 16/83 (19%) | ||
CAC1F_C | 1583..2092 | CDD:318975 | |||
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 80/311 (26%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 18/132 (14%) | ||
Ion_trans | 835..1028 | CDD:278921 | 55/205 (27%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 24/245 (10%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 96/274 (35%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 14/55 (25%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 81/252 (32%) | ||
GPHH | 1880..1930 | CDD:293510 | 14/54 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |