DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ko and stox2a

DIOPT Version :10

Sequence 1:NP_524193.2 Gene:ko / 40330 FlyBaseID:FBgn0020294 Length:1049 Species:Drosophila melanogaster
Sequence 2:XP_001922898.4 Gene:stox2a / 571741 ZFINID:ZDB-GENE-090313-101 Length:1057 Species:Danio rerio


Alignment Length:1028 Identity:221/1028 - (21%)
Similarity:358/1028 - (34%) Gaps:295/1028 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ILQRCLAIQLTK------PGHTPEDFWMYDSGYMIFQNFLAANAQCWWNGPLTAATRALKYAGHV 73
            |....|||.|::      .....|....:.:||.||.:|.|.|.|.:||..:|.|.....:.|.:
Zfish     7 IAPHSLAIVLSRVSGEEAAAAVTEKLQHHHTGYEIFADFKAENMQHFWNKKVTDAISETFFLGWI 71

  Fly    74 APGMLLVTAEPCALEVLRGAFARSVLKPPATYVISSVGDIDDCIVTPTVQGQFTPLPEALCDVIM 138
            ...:||:..:...|||||..:.|..||||..:.|..:||:....::|..|.||.||.|.||..|.
Zfish    72 DEHVLLIQGKEDHLEVLREGWTRRALKPPRGFEIKCIGDVSPISMSPISQSQFIPLGEILCLAIS 136

  Fly   139 DLTAEGQSATIEHVRSKLGSRFPHMTTPATEVIYDSLAQLMQEQKIYQTSKGYFIFTPER---RR 200
            .:.:..:..|.:.:...|.:.||.:.||:.|::..:|..|::|:|||.|.:||||.||:.   ..
Zfish   137 AMNSARKPVTQDALMEHLATCFPGVPTPSPEILRHTLNMLVRERKIYPTPEGYFIVTPQTYFITP 201

  Fly   201 SRSRPRSNHHQLNGSLAYGHLAEEEQQHGDDVVPQEARTMLMSNSEALHSLYGEISTERDGDLTH 265
            |..|..|..:.|:..    |...::||.     .|:.:..|....:.......:.::.:.|.:|.
Zfish   202 SLIRTNSKWYHLDER----HPERQQQQQ-----QQQQQQQLQQQQQQPPPPQQQCTSPQSGTITP 257

  Fly   266 Q---CIQTNLADVICGGNPNDK--------------IIYPRAAKRRS--------ASFPTPRSLE 305
            .   |::.         .||.|              .|:....:|:|        .|:|.|..  
Zfish   258 STSGCVRE---------RPNPKNHCDSYNAYRDEVPSIHTSTIQRKSPKEPKGDPPSYPQPPP-- 311

  Fly   306 RRHSLRLFGSSKRLQRCASTRSLSKTYAQTLN-TTDSSSSEYQ-----STDSSSPKKGSLLSRL- 363
                     ....:|........|||...|.: .||:.:.:.:     |::..|.|.|..|.|| 
Zfish   312 ---------PPPAIQHPPDPADKSKTMTATFSYKTDTLTKKKEGSGGGSSERQSKKFGLKLFRLS 367

  Fly   364 FRRSGRAKQRQIETYSAQFPPAEW----------------------------------------- 387
            |::.   |.:|:.|:||||||.||                                         
Zfish   368 FKKD---KTKQLATFSAQFPPEEWPLRDEDTPSAAAIPREVEMEIIRRINPDLTVENVARHTAVM 429

  Fly   388 ------------FNTRAVH----LHSVGTQTAEHDMPVAHTLSNSTFYD---GSELSQRSSTLPR 433
                        .|:.|.|    ..|.|.:...|....:|:.:.::..|   ||.|...:.:|.|
Zfish   430 KRLEEERAQRCKANSSAQHSARSRRSRGHRRVPHGKSRSHSKTRASRGDPSEGSNLDLPAVSLER 494

  Fly   434 RHRRHMSSESTFLISSRDCSP------IRRR---------SPVYCSSSLP--------------R 469
            .:|        |...|...||      :.||         :|....|..|              |
Zfish   495 DYR--------FFSHSLVRSPREGMYTMERRGGGAYLVHSNPNIAESHFPVTPEWDVSGELAKRR 551

  Fly   470 STQSIPATTAKTNHSS-RLSHGH---GGSVTPTPPKTAQK---------------SVIG-KHIFE 514
            :....|..:..|:||. ..||.|   ..|....|.|..::               |.:| ...::
Zfish   552 TEMPFPEPSRGTSHSRVHRSHSHTQDRKSRNERPDKAKERSRSMDNSKGPLGGGSSTLGTAEDYD 616

  Fly   515 SSP---SR----SATLKATAAKR-HTDGLIINSCLDNKATYRSLQSS----GPSSLESCKTTSML 567
            .||   ||    ..||:|::.|. |      .||:...|...|.:.|    |..||:..:..|.|
Zfish   617 RSPDDRSRYYTDDGTLRASSQKAPH------YSCIMFSAAKFSSEMSVTDMGKMSLDESRLCSPL 675

  Fly   568 ASGPSSIDSGKVSFSQKTSGHSSLDS--QCST-NTAVIAPPSNSNNGSSRSILLLNGSPRGTPRH 629
            ....|.......|..:..|.....|.  ||:| |..::..|.........::...:|..:|:|  
Zfish   676 ERNKSRDSLPAYSDLKALSPKPLADDYFQCNTSNETILTAPLPLGKSDHDTLTPSDGIRKGSP-- 738

  Fly   630 QAMRARVAEAQAQRQRASTPSRIMEEIYPAG-GSNGVPTSNSN-----NSITLQ---VTTSNGNQ 685
                   |:.|.....:..|....|:....| ..:|.||.:..     |...:|   .|...|..
Zfish   739 -------ADRQTPHLTSPHPLEYKEDSSTKGHNGSGKPTPSQTPEPMPNGRLIQHQHNTDPGGGG 796

  Fly   686 SIPST--------KIFVQNS---PVRSVITL--------ENGKMLENSNVFIINNETMTNEKGEI 731
            ...||        :||.:::   |..:|:|:        ::|.:.:..::           |...
Zfish   797 GGGSTGGGVDKRKEIFSKDTLFKPPHNVLTVSYVDSGYSKSGTLRKTPHM-----------KSSE 850

  Fly   732 IKKTLSKQ--------TSAAPAATSTPVKPETVSEQPLSETEANSETCDSISFISECSPESTCAV 788
            :..||..|        :::|||.|.|.....:.||........:.:  |....:.:.|.:.....
Zfish   851 VLDTLETQQPPNSTALSASAPAPTGTEQGAPSTSEAAFDYYNVSDD--DDEEEVEDTSRKEAAPT 913

  Fly   789 EPE--TPVYDGG--------------------KYAKN----TNNDATMNNSRK 815
            |.:  ..|.:||                    |:..|    :..::..|||:|
Zfish   914 EAKVRAGVGEGGGGGGTMQWLLEREKERDLQRKFETNLTLLSPKESENNNSQK 966

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
koNP_524193.2 Stork_head 118..196 CDD:431182 28/77 (36%)
stox2aXP_001922898.4 None

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