DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ko and stox1

DIOPT Version :9

Sequence 1:NP_001262135.1 Gene:ko / 40330 FlyBaseID:FBgn0020294 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_001116482.1 Gene:stox1 / 568146 ZFINID:ZDB-GENE-030925-2 Length:967 Species:Danio rerio


Alignment Length:993 Identity:218/993 - (21%)
Similarity:354/993 - (35%) Gaps:262/993 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SGYMIFQNFLAANAQCWWNGPLTAATRALKYAGHVAPGMLLVTAEPCALEVLRGAFARSVLKPPA 103
            ||..:|.:|.:.|.:.:||..|..|...:.:.|.:...:|||......|||||.|:.|..|:.|.
Zfish    34 SGQDVFGDFRSQNLRSFWNKRLVKAVAEVSFQGWLENYVLLVQGNANNLEVLREAWMRRALRSPK 98

  Fly   104 TYVISSVGDIDDCIVTPTVQGQFTPLPEALCDVIMDLTAE----GQSATIEHVRSKLGSRFPHMT 164
            .|.|.:|||:....::|..|.||.||.|.||.||.||.|:    .|.|.|.::...    .|.||
Zfish    99 GYTIKAVGDLSPVQMSPISQSQFIPLSEILCSVISDLNADHVVVNQEALINYMMKS----HPGMT 159

  Fly   165 TPATEVIYDSLAQLMQEQKIYQTSKGYFIFTPERRRSRSRPRSNHHQLNGSLAY---GHLAEEEQ 226
            .|..:::|::|..|::|:|||.|.:|||:.||:                   .|   .::.:|..
Zfish   160 IPTQDILYNALGTLIKERKIYHTGEGYFVVTPQ-------------------TYFITNNMVKERN 205

  Fly   227 --QHGDDVVPQEAR-TMLMSNSEALHSLYGEISTERDGDLTHQCIQTNLADVICGGNPNDKIIYP 288
              ..||:.:|.... |.|:||                    ..||.|: ::|            |
Zfish   206 WWSAGDNDLPSPPPITYLVSN--------------------ESCIDTS-SEV------------P 237

  Fly   289 RAAKRRSASFPT-----PRSLERRHSLRLFGSSKRLQRCASTRSLSKTYAQTLNTTDSSSSEYQS 348
            ..|..:|.|..|     |.|::...|:.:...:.:..:.......|..:..|....|..:||...
Zfish   238 VMAHCKSCSCFTPPSIVPPSIQDHQSISISDCTGKSLKWPKEHKPSVQHQSTSTAADYQASEVSK 302

  Fly   349 TDSSSPKKGSLLSR-----LFRRSGRAK----QRQIETYSAQFPPAEWFNTRAVHLHSVGTQTAE 404
            :.::|.|:.....|     ||||:...|    :::..|:||||||.||.......|::: .:..|
Zfish   303 STTTSRKEKEKAGRKFGLSLFRRNTGKKDNKPKKEYATFSAQFPPEEWPVRDEDDLNNL-PRDLE 366

  Fly   405 H------------DMPVAHTLSNSTFYDGSELSQRSST---------LPRRHRRHMSSESTFLIS 448
            |            |..|.||:......:.:|.....:.         :|:  :||.||::....|
Zfish   367 HAIIKRINPDLTVDNLVKHTVLMKKLEEKAERGMEKAVDKGISTEALVPK--QRHHSSKAMGKKS 429

  Fly   449 SRDCSPIRRRSP------------VYCSSSLPRSTQSIPATTAKTNHSSRLSHGHGGSVTPTP-- 499
            :...:..:||.|            :.|:..|....|.:|             |..|......|  
Zfish   430 APRATRNKRRGPSSKEKQRTKNKTLQCAVELEADDQILP-------------HLRGEYALDEPDN 481

  Fly   500 PKTA----QKSVIGKHI---FESSPSR--SATLKATAAKR-----------------------HT 532
            |:..    ||||..|.|   |...|.|  ...:.....||                       |.
Zfish   482 PEECTHPNQKSVYKKRIDNPFLGLPGRDMETNINHMEQKRREGKIPVTGHGERPGHRSKSWDPHR 546

  Fly   533 DGLIINSCLDNKATYRSLQSSGPSSLESCKTTSMLASGPSSIDSGKVSFSQKTSGHSSLDSQCST 597
            ...||:| :|...|.:.:    ||.....:|    ....|::|...|  .:...|:||...:.||
Zfish   547 PKAIIDS-VDKSQTIKDV----PSEQLHDRT----HPADSTLDEQPV--QELCGGYSSAYPESST 600

  Fly   598 NTAVIAPPSNSN--------NGSSRSILLLNGSPRGTPRHQAMRARVAEAQAQRQRASTPSRIME 654
            ...........|        ||.:|.....:|..|..|..:.|..............|.|...::
Zfish   601 LRIEDKIKLRENKVRSREFRNGRTREFKKQDGGQRHVPEQKNMLDHPTHCDTTEVHLSWPKPTIQ 665

  Fly   655 EIYPAGGSNGVPTSNSNNSITLQVTTSNGNQSIPSTKIFVQNSPVRSVITLENGKMLENSNVFII 719
            ........|....|:....: |.:....||.||.      |.|..:|:          :.|....
Zfish   666 RRLSLHLLNSKEESHHRPDL-LSLHHQVGNISIH------QLSDCQSL----------DRNTSHT 713

  Fly   720 NNETMTNEKGEIIKKTLSKQTSAAPAATSTPVKPETVSEQPLSETEANSETCDSI--------SF 776
            .:|..|:::..|.:|                             |||:.:.|.|:        |.
Zfish   714 ESEVYTDDEHRIYQK-----------------------------TEADEDDCSSVCMNEEGVNSK 749

  Fly   777 ISECSPESTCAVEPETPVYDGGKYA----KNTNNDATMNNSRKLCLQ--------LANGIAYKNN 829
            :|:.|.    |...|....|||..|    ::|::.......|:...:        |.||...:.:
Zfish   750 LSQISK----AHHSEPVCVDGGWDAHFSEEHTHHKPIRTTYRQHEFRWQSSDHKVLHNGPKEEVH 810

  Fly   830 VLKNESQPNSPSADAPLKMAALAKQDF----EIAGSVGNLNFYEKSSKDVGASQSNNMMMNSSTD 890
            :.|.:...:|...|...:....:..|:    |:......|:   ||:.:..|.:||:.:.:  .:
Zfish   811 IFKKKEHESSLENDEHAETLESSIFDYCQTSEVESDSETLH---KSADEADAGKSNHWICH--PE 870

  Fly   891 LKNLCYESVCQLQKCSMN 908
            ||: |::...|..|.:.|
Zfish   871 LKD-CHQCTIQTSKDTGN 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
koNP_001262135.1 Stork_head 119..195 CDD:287266 32/79 (41%)
stox1NP_001116482.1 Stork_head 114..190 CDD:287266 32/79 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593978
Domainoid 1 1.000 68 1.000 Domainoid score I9686
eggNOG 1 0.900 - - E1_KOG3897
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006082
OrthoInspector 1 1.000 - - otm24214
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22437
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3228
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.870

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