DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ko and stox1

DIOPT Version :9

Sequence 1:NP_001262135.1 Gene:ko / 40330 FlyBaseID:FBgn0020294 Length:1049 Species:Drosophila melanogaster
Sequence 2:XP_002936915.3 Gene:stox1 / 100495850 XenbaseID:XB-GENE-1012540 Length:977 Species:Xenopus tropicalis


Alignment Length:1088 Identity:212/1088 - (19%)
Similarity:388/1088 - (35%) Gaps:284/1088 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PQRCRLILQRCLAIQLTKPGHTPEDFWMYDSGYMIFQNFLAANAQCWWNGPLTAATRALKYAGHV 73
            |....|:|.|....:..:.|...|:    :.|..||::|.|||.:|:||..|..|...:.:.|.:
 Frog    12 PSTLALVLCRVEGSREEERGSCGEE----EGGRRIFKDFQAANVKCFWNRRLVRAVSEVAFQGWL 72

  Fly    74 APGMLLVTAEPCALEVLRGAFARSVLKPPATYVISSVGDIDDCIVTPTVQGQFTPLPEALCDVIM 138
            ...:|||..:...|||||.|:.|..|:||..::|.::||:....:.|..|..|.||.|.||..|.
 Frog    73 ESWVLLVEGQSAELEVLRDAWVRRALRPPRGFIIRALGDVSPVQMNPISQSHFIPLAEVLCCAIS 137

  Fly   139 DLTAEGQSATIEHVRSKLGSRFPHMTTPATEVIYDSLAQLMQEQKIYQTSKGYFIFTPERRRSRS 203
            |:.......|.|.:...|...:..:.||:.:::|::|..|::|:|||.|.:||||.||:      
 Frog   138 DMNTTQILVTQESLLEHLNKHYRGIATPSQDILYNALGTLIRERKIYHTGEGYFIVTPQ------ 196

  Fly   204 RPRSNHHQLNGSLAYGHLAEEEQQHGDDVVPQEARTMLMSNSEALHSLYG---EISTERDGDLTH 265
                                               |..::...||...|.   ::||. ...:|:
 Frog   197 -----------------------------------TYFITRKPALDCKYAASEKLSTS-PPPITY 225

  Fly   266 QCIQTNLADVICGGNPNDKIIYPRAAKRRSASFPTPRSLERRHSLRLFG-SSKRLQRCASTRSLS 329
            .....:.||:..|..|:       .:..||.|..:.:||:     .:.| .|....:..||:|:.
 Frog   226 LVSMESCADLTKGNMPS-------VSHCRSCSCFSEQSLQ-----NILGQQSINESQVKSTKSVK 278

  Fly   330 KTYAQTLNTTDSSSSEYQSTDSSSP-----------KKGSLLSRLFRRSGRAKQ---RQIETYSA 380
            :......|...|:|.::.:.:.:..           ||..:  .||.|:...|:   :::.|:||
 Frog   279 EQKPLLRNQATSTSRDHYTCEKNKEQVVLKEKEKCGKKFGI--SLFWRNVSKKEKSRKELVTFSA 341

  Fly   381 QFPPAEWFNTRAVHLHSVGTQTAEHDM-----PV-------AHTL------------SNSTFYD- 420
            ||||.||......:|.:: .:..||::     ||       .|||            |..|..| 
 Frog   342 QFPPEEWPVRDEDNLDNI-PRDVEHEIIKRINPVLTVDNLMKHTLLMQKAEEQKKYFSKGTSTDI 405

  Fly   421 ----------GSELSQRSSTLPRRHRRHMSSESTFLISSRDCSPIRRRSPVYCSSSLPRSTQSIP 475
                      ||. .::|..:.:.|::..|.:.            :.:.......:||...:.| 
 Frog   406 IKNKHSYNCKGSS-RKKSGKMSKYHKKIQSGKE------------KCKKDTVAPRALPHEEKDI- 456

  Fly   476 ATTAKTNHSSRLSHGHGGSVTPTPPKTAQKSVIGKHIFESSPSRSATLKATAAKRHTDGLIINSC 540
                     :|||.....:       |.....:.:|.|.|:   ......|..|:.     |::.
 Frog   457 ---------NRLSLDQSDA-------TDDVMAVDRHCFVSA---ELVQHDTVYKKQ-----ISNP 497

  Fly   541 LDNKATYRSLQSSGPSSLESCKTTSMLASGPSSIDSGKVSFSQKTSGHSSLDSQCSTNTAVIAPP 605
            .|......|...:|..||:..|.:.          |||    |:.....|....|:...|.....
 Frog   498 FDGIPYRESSNVNGHKSLKEIKRSR----------SGK----QRRCVPRSRSLDCTERKAADNHV 548

  Fly   606 SNSNNGSSRSILLLNGSPRGTPRHQAMRARVAEAQAQRQ-----RASTPSRIMEEIYPAGGSNGV 665
            .:.|  |.|.|...:..    |.|:...:.:::....|:     ..|:..||.::..||...|..
 Frog   549 EHIN--SERHIAAYSNE----PYHEQFHSVLSDKDDLREYPPSYPQSSTLRIDDKFKPAKEENSA 607

  Fly   666 PTSNSNN----------SITLQVTTSNGNQSIPSTKIF--------------------------- 693
            ....|.:          .:.:.:..|..::.:.|..::                           
 Frog   608 SVLYSEDRAYICDDFQKKLFVHLEASAEHEVVKSHSVYKGTSMNSAKPNHCKSEMNLNLIGRTHY 672

  Fly   694 --VQNSPVRSVITLEN--------GKMLENSNVFIINNETMTNEKGEI--------IKKTLSKQT 740
              .::|..|.|....|        .|.:..:..|..:|:.:.....||        ::.....:|
 Frog   673 GMSEDSGARKVCNYSNSGLKESDMSKYISETGGFAKDNKALCQRTVEIDDAHRYLYLEDDTKDKT 737

  Fly   741 SAAPAATSTPVK-------PETVSEQPLSETEANSETCDSISFISECSPESTCAVEPETPVYDGG 798
            ...|...|...|       .:.|.|.......:.|:....::|    :|:...:::.:...|...
 Frog   738 EICPVLESHLQKNLDAVNWNDLVDENKNGTGNSQSQWHPKMTF----APQFGSSIDNDQETYSPS 798

  Fly   799 KYAKNTNNDA---TMNNSRKLCLQLANGIAYKNNVLKNESQPNSPSADAPLKMAALAKQDFEIAG 860
            .::.:.:::.   |::..:.|...:...:         |.:|.:.....||:         .:.|
 Frog   799 LFSLDGSHECHKQTLHTGQPLPDYIHGHL---------EVEPETADCINPLE---------HVDG 845

  Fly   861 SVGNLNFYEKSSKDVGASQSNNMMMNSSTDLKNL------------CYESVCQLQKCSMNGDELA 913
            |:.:   |..||:....:::.:|.:|.: |.|::            |:|....|....||..|..
 Frog   846 SIFD---YCNSSEANSVAETLHMSINGN-DEKHIANSGQQSGEMRTCFEHKLTLFHSKMNPSETG 906

  Fly   914 --LAHLLHKSSNPLGSEPNLALKDLANDKSIDKEAIDRRLSLTKESLE 959
              ..:..|.::...|.|.......:|::.|:..|.:.||..|  ::||
 Frog   907 HHEKNENHSTTGDSGIESPRTRISIASNNSVVLETLKRRTFL--QNLE 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
koNP_001262135.1 Stork_head 119..195 CDD:287266 27/75 (36%)
stox1XP_002936915.3 Stork_head 117..195 CDD:402054 27/77 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I10014
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006082
OrthoInspector 1 1.000 - - oto105076
Panther 1 1.100 - - LDO PTHR22437
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3228
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.130

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