DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ko and stox2

DIOPT Version :9

Sequence 1:NP_001262135.1 Gene:ko / 40330 FlyBaseID:FBgn0020294 Length:1049 Species:Drosophila melanogaster
Sequence 2:XP_012811105.1 Gene:stox2 / 100485979 XenbaseID:XB-GENE-5852839 Length:926 Species:Xenopus tropicalis


Alignment Length:913 Identity:210/913 - (23%)
Similarity:313/913 - (34%) Gaps:265/913 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 PATYV------ISSVGDIDDCIVTPTVQGQFTPLPEALCDVIMDLTAEGQSATIEHVRSKLGSRF 160
            |.|::      ..:.||:....::|..|.||.||.|.||..|..:.:..:..|.|.:...|.:.|
 Frog    41 PPTFISQASRGYMTSGDVSPISMSPISQSQFIPLGEILCVAISAMNSARKPVTQEALIEHLTTFF 105

  Fly   161 PHMTTPATEVIYDSLAQLMQEQKIYQTSKGYFIFTPERRR-SRSRPRSNHHQLNGSLAYGHLAEE 224
            |.:.||:.||:..:|..|::|:|||.|..||:|.||:... :.|..|:|.       .:.||.|.
 Frog   106 PGVPTPSPEVLRHTLNMLVRERKIYPTPDGYYIVTPQTYYITPSLIRTNS-------KWYHLDER 163

  Fly   225 EQQHGDDVVPQEA------------RTMLMSN-------SEALHSLYGEISTERDGDLTHQCIQT 270
            .........||..            ||:..::       .|.:||::......|.   ...|..:
 Frog   164 IPDRSQCTSPQPGTITPSPSGCVRDRTLSKNHCDSCHCCREDMHSIHASTLQRRS---PKDCKDS 225

  Fly   271 NLADVICGGNPNDKIIYPRAAKRRSASFPTPRSLERRHSLRLFGSSKRLQRCASTRSLSKTYAQT 335
            .....||...|.:|                                            ||:   |
 Frog   226 YCPPSICQIPPTEK--------------------------------------------SKS---T 243

  Fly   336 LNTTDSSSSEYQSTDSSSPKKGSLLSRLFRRS-GRAKQRQIETYSAQFPPAEWFNTRAVHLHSVG 399
            :|.:..:.:..:|.|...|.|...| :|||.| .:.|.:|:..:||||||.||      .|....
 Frog   244 INYSYKTETLTKSKDGEKPSKKFGL-KLFRLSFKKDKAKQLANFSAQFPPEEW------PLRDED 301

  Fly   400 TQTA---EHDMPVAH------TLSNSTFYDG------SELSQRS--------STLPRRHRRHMS- 440
            |.|.   |.:|.:..      |:.|...:..      .|.||||        |...||.|.|.. 
 Frog   302 TPTTIPREVEMEIIRRINPDLTVENVVRHTALMKKLEEEKSQRSKAGSSAHHSGRSRRSRTHRKT 366

  Fly   441 -----SESTFLISSRDCS-----------------PIRRRSP-------------VYCSSSLPRS 470
                 |.|....|..|.|                 | |.|||             .:...|.|..
 Frog   367 HGKSRSHSKNRASKGDPSEGSHLDIPAEREYEFYHP-RNRSPREGCFIMERKGGENFVVLSNPSM 430

  Fly   471 TQSIPATTAKTNHSSRLSHGHGGSVTPTPPKTAQKSVIGKHIFESSPSRSATLKATAAKRHT--- 532
            .:|....|.:.:.|..|:........|.|.:.:..|.:.:....:...||...::..||..:   
 Frog   431 IESHFPVTPEWDVSGELAKRRTEMPFPEPSRGSSHSKVHRSHSHTQDRRSRNERSNKAKERSRSM 495

  Fly   533 ---------------DGLIINSCLDNKATYRSLQSSG---PS-SLESCKTTSM-------LASG- 570
                           |.|.....||.|...:|....|   || ||...:|.|.       |||| 
 Frog   496 DNSKGPLSGASLGTPDDLGEGCSLDEKTPSQSYIDDGTLRPSHSLTHQRTLSYKDPCITELASGG 560

  Fly   571 ---PSS---IDSGKVSFSQKTSGHSSLDS----------QCSTNTAVI----APPSNSNNGSSRS 615
               |.|   |:.||:  ....|.:|.|:|          ||:|::..|    :|...||......
 Frog   561 ADTPKSCSLIEQGKL--PDTLSSYSELNSCSKKTADDYFQCNTSSETILTAPSPLGKSNKEDIDI 623

  Fly   616 ILLLNGSPRGTPRHQAMRARVAEAQAQRQRASTPSRIMEEIYPAGG------SNG--VPTSNSNN 672
            ..|..|..|.:|..:..: .:|..|.:.:..|...:|......|.|      |||  ||..|:.:
 Frog   624 SSLTEGLKRLSPAEKPQQ-HIAREQGEYRAESPKGQISVLSIAASGQSPEVISNGRLVPHHNAES 687

  Fly   673 SITLQVTTSNGNQSIPSTK-IFVQNS---PVRSVITLENGKMLENSNVFIINNETMTNEKGEIIK 733
            |            |:...| ||.:::   |:.:.:::.:   ...|.|.::.:...|:      .
 Frog   688 S------------SLDKRKEIFSKDTLFKPLHNSLSVNS---FHKSGVSLLKSHQKTS------P 731

  Fly   734 KTL--SKQTSAAPAATSTPVKPETVSEQPLSETEANSETCDSISFISEC--SPEST-CAVEPETP 793
            :||  |.:....|..||.. :...||.:| .|..||.|.......:||.  |.|.| ..||.|  
 Frog   732 ETLPASVENFEQPITTSVS-QNLAVSPRP-QEPGANPEASFDYYNVSEDDESEEGTQKTVEEE-- 792

  Fly   794 VYDGGKYAKNTNNDATM------NNSRKLCLQLANGIAYKNNVLKNESQPNSPSADAPLKMAALA 852
                    ||.::..||      ...|.|..:..     ||..|.|..:..:.|:......|.|.
 Frog   793 --------KNRDDVGTMQWLLQREKERDLQRKFE-----KNLTLLNPKESENSSSQRTTHSARLD 844

  Fly   853 KQD 855
            ..|
 Frog   845 SMD 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
koNP_001262135.1 Stork_head 119..195 CDD:287266 29/75 (39%)
stox2XP_012811105.1 Stork_head 64..140 CDD:370933 29/75 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3228
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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