DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and Arfgef2

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001078964.1 Gene:Arfgef2 / 99371 MGIID:2139354 Length:1792 Species:Mus musculus


Alignment Length:790 Identity:183/790 - (23%)
Similarity:291/790 - (36%) Gaps:223/790 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 TIQRAFRHYMMVKKFASITAMAKAEKRLSRRMVVTASSLGLAEEGASSSSAYGSATESQLTEQQQ 406
            |::..:..|:..|...:.|. |||.......::.|                   ..|:|:.::.:
Mouse   162 TVRTCYNIYLASKNLINQTT-AKATLTQMLNVIFT-------------------RMENQVLQEAR 206

  Fly   407 QQQAQQQQQPRVTIMAGPAGAASPGLSR-----------TPPTRSLSMRERRQ-------LDCSP 453
            :.:...|.:|:..::...||  ||..||           ||....|...:..|       |:...
Mouse   207 ELEKPMQSKPQSPVIQATAG--SPKFSRLKQSQAQSKPTTPEKAELPNGDHAQSGLGKVSLENGE 269

  Fly   454 IPRSQ----SG-ASPASISSS-----------TVSTSALASHPHVNLLHAAEPH----------Y 492
            .||.:    || |.|:..:.|           .|.|||:.        .|||.|          .
Mouse   270 APRERGSPVSGRAEPSRGTDSGAQEVVKDILEDVVTSAVK--------EAAEKHGLPEPDRALGA 326

  Fly   493 YNAQ--ALPQGAAYYTSYHGSPHDLSYASSADT--------SLNASWVNTSGHSPHTPYYSAAQI 547
            ...|  |:|.|....:..:|...|....||||.        .:.|.:.:.........:.|..::
Mouse   327 LECQECAVPPGVDENSQTNGIADDRQSLSSADNLEPDVQGHQVAARFSHILQKDAFLVFRSLCKL 391

  Fly   548 YMRPKGGSTTPTPSCSGSTGSGSGGSGSGSSKKVPPEVPKRTSSITAQQQTQLLLLQRQTPPPPS 612
            .|:|.|                          :.||: ||.....:.....||||...|...|  
Mouse   392 SMKPLG--------------------------EGPPD-PKSHELRSKVVSLQLLLSVLQNAGP-- 427

  Fly   613 LLRTNGLCKTAENGSLTSVQSSGSDSSVTSA----------------------------ERNLNS 649
            :.|::.:..||....|....|....|||...                            |..||.
Mouse   428 VFRSHEMFVTAIKQYLCVALSKNGVSSVPDVFELSLAIFLTLLSNFKMHLKMQIEVFFKEIFLNI 492

  Fly   650 DLGSDRSNSPHTWKRGTALNSSQQFSTHSADSAGAVSGGGVGVAGGAGVYAAQM------QAAVA 708
             |.:..|:..|.|.      ..|..:...||:...|.   :.|.....:.||.:      ..:..
Mouse   493 -LETSTSSFEHRWM------VIQTLTRICADAQCVVD---IYVNYDCDLNAANIFERLVNDLSKI 547

  Fly   709 AATAAG---GMPPADDHAI--------------------------SSHTSAAQYEQHEQQQHEQQ 744
            |...:|   ||.|..:.::                          :...:..|....:|:..:.:
Mouse   548 AQGRSGHELGMTPLQELSLRKKGLECLVSILKCMVEWSKDLYVNPNHQATLGQERLPDQEMGDGK 612

  Fly   745 QLQAA--------------AAAAGVAQNYKMSETIRKRQYRV--GLNLFNKKPEKGITYLIRRGF 793
            .|..|              .....:..:.:..|.|::::..:  |:.||||||::||.:|..:|.
Mouse   613 GLDMARRCSVTSVESTVSSGTQTAIQDDPEQFEVIKQQKEIIEHGIELFNKKPKRGIQFLQEQGM 677

  Fly   794 LENTPQGVARFLITRKGLSRQMIGEYLGNLQNQFNMAVLSCFAMELDLSGRQVDVALRKFQAYFR 858
            |....:.:|:||...:.|....:||:||: ..:||..|:..:..:||...::...|||.|...||
Mouse   678 LGAAVEDIAQFLHQEERLDSTQVGEFLGD-STRFNKEVMYAYVDQLDFCEKEFVSALRTFLEGFR 741

  Fly   859 MPGEAQKIERLMEIFSQRYCECNADIVGR--LRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMRV 921
            :|||||||:||||.|:.||.|||.   |:  ..|:||.:|||::||||.||||:|.:|  .:|..
Mouse   742 LPGEAQKIDRLMEKFAARYIECNQ---GQTLFASADTAYVLAYSIIMLTTDLHSPQVK--NKMTK 801

  Fly   922 EDFIKNLRGIDDCHDIDKDMLMGIYDRV--KSDEFKPGSDHVTQVMKVQATIVGKKPNLALPHRR 984
            |.:||..|||:|..|:.::.|..|||.:  |....|...:|.......:.::..:|      .||
Mouse   802 EQYIKMNRGINDSKDLPEEYLSSIYDEIEGKKIAMKETKEHTIATKSTKQSVASEK------QRR 860

  Fly   985 LVCYCRLYEI 994
            |     ||.:
Mouse   861 L-----LYNV 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178 79/193 (41%)
PH_IQSEC 981..1108 CDD:270128 5/14 (36%)
Arfgef2NP_001078964.1 DCB, DCB:DCB domain and DCB:HUS domain interaction. /evidence=ECO:0000250 2..224 12/81 (15%)
PLN03076 11..1718 CDD:215560 183/790 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..294 20/88 (23%)
HUS, DCB:HUS domain interaction. /evidence=ECO:0000250 515..535 5/22 (23%)

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