DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment siz and SYT1

DIOPT Version :9

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_015420.1 Gene:SYT1 / 856210 SGDID:S000006299 Length:1226 Species:Saccharomyces cerevisiae


Alignment Length:936 Identity:170/936 - (18%)
Similarity:278/936 - (29%) Gaps:349/936 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 KAEKRLSRRMVVTASSLGLAEEGASSSSAYGSATESQLTEQQQQQQAQQQQQP------------ 416
            |...:|||    ....:|..:....|::..||..:..|..|..:.....::.|            
Yeast    74 KKHSKLSR----IRRKMGRLDLNFRSANEKGSEDDEILVAQHLRNGQDPEEMPFKSENNIDSIEK 134

  Fly   417 -------RVTIMA------------GPAGAASPGLSRTPPTRSLSMRERRQLDCSPIPRSQSGAS 462
                   |||:.:            .|.....|.|.:.|.:..||...|:..:  |...:.....
Yeast   135 VPKPDGERVTLTSSGSDNVKRNSKHAPFIPVKPALEKFPSSNRLSRDYRKSQE--PTLFNGDRLV 197

  Fly   463 PASISSSTVSTSALASHPHVNLLHAAEPHYYNAQALPQGAAYYTSYHGSPHDLSYASSADTSLNA 527
            |...:.|.:|||:....      ..|...|:|    |...|...|...|...:.:.|.....|:|
Yeast   198 PTLPTVSRISTSSSVGS------STAASRYFN----PSKRAVVASSSSSSSSIKFNSLHAIPLDA 252

  Fly   528 SWVNTSGHSPHTPYYSAA----QIYMRPKGGSTTPTPSCSGSTGSGSGGSGSGSSKKVPPEVPKR 588
                       ||....|    :|..|..|...:.|.........      :.::|..||..|..
Yeast   253 -----------TPQIELAKQQDEISKRRFGRRRSRTVDVFDYINK------NNTAKNKPPLSPSS 300

  Fly   589 TSSITAQQQTQLLLLQRQTPPPPSLLRTNGLCKTAENGSLTSVQSSGSDSSVTSAERNLNSDLGS 653
            ......::.|..|:   |.|             ....|.|..     .|:::.|     |...|:
Yeast   301 FIRTIDEKNTNSLM---QDP-------------MGSRGPLLP-----DDANIIS-----NDTDGA 339

  Fly   654 DRSNSPHTWKRGTALNSSQQFSTHSADSAGAVSGGG--------------VGVAGGAGVYAAQMQ 704
            :.|:..|           |..|...:.|...|.|.|              :|:..|:|..:....
Yeast   340 EASHPDH-----------QVLSRSRSQSTSFVQGKGGKRKSIEDEGYHNKLGLPHGSGPTSVYNN 393

  Fly   705 AAVAAATAAGGMPPADD--HAISSHTS------AAQYEQHEQQQHEQQQLQAAAAAAGVAQNYKM 761
            .:.|.:|..|....:..  :|:||..:      ::..:||.||   |||||              
Yeast   394 KSNANSTITGMSRRSSSIVNALSSFVNLRSSSLSSSRQQHLQQ---QQQLQ-------------- 441

  Fly   762 SETIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQGVARFLITRKGLSRQMIGEYLGNLQNQ 826
                  ::..|.|......|....:...:...::..|.|             :.||..|....::
Yeast   442 ------QKLDVSLEDLPPVPAPEFSDSCKDFLIKLAPYG-------------KFIGIILTEKDDE 487

  Fly   827 F-----NMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRY--------- 877
            |     |..:.:||..:.|    .:|:||||...:..:|.|.|:|:||:..||..|         
Yeast   488 FKKNCLNYLLTNCFEFKND----PLDIALRKLLMFLELPKETQQIDRLIMAFSFAYYKAQKSYSK 548

  Fly   878 ---CEC---NADIVGRLRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGIDDCHD 936
               .||   ||         |.::.:||:::||:||...||.|  .:|...||:           
Yeast   549 KKGIECPWSNA---------DQVYFIAFSLLMLHTDYFNPNNK--SKMTKHDFV----------- 591

  Fly   937 IDKDMLMGIYDRVKSDEFKPGSDHVTQVMKVQATIVGKKPNLALPHRRLVCYCRLYEIPDVNKKE 1001
                      |.|.:|::..|:                                  |||      
Yeast   592 ----------DLVHNDKYSGGN----------------------------------EIP------ 606

  Fly  1002 RPGVHQREVFLFNDLLVITKIFSKKKTSVTYTFRNSFPLCGTVVTLLDMPNYPFCIQLSQKVDGK 1066
                                     ...:||.:.|        ||..:.|.:.:.:.....:|..
Yeast   607 -------------------------MAVLTYFYEN--------VTAKESPKFNYFLMSPMALDDS 638

  Fly  1067 IL----------ITFNARNEHDRCKFAEDLKESISEMDEMESLR-IEAELERQKSARNRAPGNAE 1120
            ||          ||.::.:.:...    |:.:..|.:.:..||. |...|....||         
Yeast   639 ILDKDAFDTNFAITLSSNSMYSPI----DMIKRGSIIPKEASLSPIFYPLTNSISA--------- 690

  Fly  1121 NRDSGVADVEVCPCPYQQGSQASGEQAPNSADNSQQLKRSALSNSLLDMHEQFGNEKPQRRGSVG 1185
               ||:|......||.......:|.....:..||.:...:::|                      
Yeast   691 ---SGIAPSTAASCPPSTSGTINGANLGTANSNSNRPASNSIS---------------------- 730

  Fly  1186 SLDSGMSISFQSTTTSSASRENAAAI 1211
                    |:.|...||:|..||..:
Yeast   731 --------SYFSYNPSSSSSGNATLV 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:279680 47/207 (23%)
PH_IQSEC 981..1108 CDD:270128 20/137 (15%)
SYT1NP_015420.1 COG5307 141..1221 CDD:227623 159/865 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10663
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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