DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and GEA1

DIOPT Version :9

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_012565.1 Gene:GEA1 / 853488 SGDID:S000003792 Length:1408 Species:Saccharomyces cerevisiae


Alignment Length:471 Identity:116/471 - (24%)
Similarity:193/471 - (40%) Gaps:124/471 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   708 AAATAAGGMPPADDHAISSHTSAAQYEQHEQQQHEQQQLQAAAAAAGVAQNYK----MSETIRKR 768
            ||...:..:||.   .:....|..:...::.|:.::         |...:|.|    :.:..||.
Yeast   491 AAVNTSNNIPPI---CLEGVLSLIENIYNDLQRFDR---------AEFVKNQKEIDILKQRDRKT 543

  Fly   769 QYRVGLNLFNKKPEKGITYLIRRGFLE-NTPQGVARFLITRKG-LSRQMIGEYLGNLQNQFNMAV 831
            ::.:.:..||:|.:|||..||.:||:: ::.:.:|.||....| |:::.||..|.:.:   ..::
Yeast   544 EFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPK---KTSL 605

  Fly   832 LSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRYCECNA-------------- 882
            |..|....|..|.:||.|:|.....||:|||:|:|||::|.||.:|....:              
Yeast   606 LKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKN 670

  Fly   883 --------DIVGRLRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGIDDCHDIDK 939
                    ||:.....:|::|||:::|||||||.|.|.:|.  .|..:|:..||||..:..|..:
Yeast   671 GSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKD--HMTFDDYSNNLRGCYNGKDFPR 733

  Fly   940 DMLMGIYDRVKSDEFKPGSDH----------------VTQVM-KVQATIVGKKPNLALPHRRLVC 987
            ..|..||..:|..|.....:|                .|.|| ::|                   
Yeast   734 WYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQ------------------- 779

  Fly   988 YCRLYEIPDVNKKERPGVHQREVFLFN---DLLVIT--KIFS---------------KKKTSVTY 1032
              |.:..| ::|..:..:.|.|..:|:   |:::.|  |||:               .|.|.:.|
Yeast   780 --RDFTNP-ISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINY 841

  Fly  1033 TFRNSFPLCGTVVTLLDMPNYPFCIQLSQK-----VDGKILITFNARNEHDRCKFAEDLKESISE 1092
            .|........||:.|.:|..   ..|.|.|     ||...|:..          |.||....||.
Yeast   842 YFSFDQSYNDTVLHLGEMTT---LAQSSAKAVELDVDSIPLVEI----------FVEDTGSKISV 893

  Fly  1093 MDEMESLRIEAELERQ 1108
            .:  :|:|:....:.|
Yeast   894 SN--QSIRLGQNFKAQ 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:279680 68/211 (32%)
PH_IQSEC 981..1108 CDD:270128 32/151 (21%)
GEA1NP_012565.1 COG5307 283..1325 CDD:227623 116/471 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344265
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10663
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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