DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment siz and SEC7

DIOPT Version :9

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_010454.3 Gene:SEC7 / 851748 SGDID:S000002577 Length:2009 Species:Saccharomyces cerevisiae


Alignment Length:571 Identity:130/571 - (22%)
Similarity:237/571 - (41%) Gaps:157/571 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   585 VPKRTSSITAQQQTQLLLLQRQTPPPPSLLR-------TNGLCKTAE------------NGSLTS 630
            :.:.|:|.:.|::..|.::||....|.:|:.       ..|:....|            ...:|.
Yeast   619 ISELTTSTSQQKRYFLSVIQRICNDPRTLVEFYLNYDCNPGMPNVMEITVDYLTRLALTRVEITQ 683

  Fly   631 VQSSGSDSSVTSAERNLN-SDL----GSDRSNSP------------------------------H 660
            .|.|..|..::.:....| |.|    .|:.|:||                              .
Yeast   684 TQRSYYDEQISKSLSTYNFSQLPLLTSSNLSSSPDVGQVNLLFPLDFALKMVSLNCIVSVLRSLS 748

  Fly   661 TWKRGTALNSSQQFSTHSADSAGAVSGGGVGVAGGAGVYAAQMQAAVAAATAAGGMPPADDHAIS 725
            :|.. .|||.    :||:|:..         :.........:.:::::....:..|...||.   
Yeast   749 SWAH-KALNP----NTHTANKV---------LLNTTSSARQESRSSLSNDVRSSIMTSNDDF--- 796

  Fly   726 SHTSAAQYEQHEQQQHEQQQLQAAAAAAGVAQNYKMSETIRKRQYRVGLNLFNKKPEKGITYLIR 790
                ...||..|.:....|.:.|.....  .:|.|    :||......:.:||.||:|.|..||:
Yeast   797 ----KPTYEDEESRSLSSQNIDADDPTQ--FENLK----LRKTALSECIAIFNNKPKKAIPVLIK 851

  Fly   791 RGFL-ENTPQGVARFLITRKGLSRQMIGEYLGNLQNQFNMAVLSCFAMELDLSGRQVDVALRKFQ 854
            :||| :::|..:|::|:..:||....:|:|||...:: |:|::..|..|.|.:|..:..|||.|.
Yeast   852 KGFLKDDSPISIAKWLLETEGLDMAAVGDYLGEGDDK-NIAIMHAFVDEFDFTGMSIVDALRSFL 915

  Fly   855 AYFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRSSDTIFVLAFAIIMLNTDLHTPNLKPERRM 919
            ..||:|||.|||:|.|..|::|:.:.|..:..:   :||.:||::::||||||||:..:|  .:|
Yeast   916 QSFRLPGEGQKIDRFMLKFAERFVDQNPGVFSK---ADTAYVLSYSLIMLNTDLHSSQIK--NKM 975

  Fly   920 RVEDFIKNLRGIDDCHDIDKDMLMGIYDRVKSDEFKPGSDHVTQVMKVQATIVGKKPNLALPHRR 984
            .:::|::|..|||:..|:.:|.|.|:::.:.::|.|..|:      :.||.:.|           
Yeast   976 SLQEFLENNEGIDNGRDLPRDFLEGLFNEIANNEIKLISE------QHQAMLSG----------- 1023

  Fly   985 LVCYCRLYEIPDVNKKERPGVHQREVF-LFNDLLVITKIFSKKKTSVTYTFRNSFPLCGTVVTLL 1048
                       |.|..::    |:..| .||         |:..|...|.               
Yeast  1024 -----------DTNLVQQ----QQSAFNFFN---------SRDLTREAYN--------------- 1049

  Fly  1049 DMPNYPFCIQLSQKVDGKILITFNARNEHDRCKFAEDLKESISEMDEMESL 1099
                     |:|:::..|..:.|...|::   |...|:..:.|.::.::|:
Yeast  1050 ---------QVSKEISSKTELVFKNLNKN---KGGPDVYYAASHVEHVKSI 1088

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:279680 68/188 (36%)
PH_IQSEC 981..1108 CDD:270128 18/120 (15%)
SEC7NP_010454.3 DCB <283..426 CDD:406594
COG5307 504..1693 CDD:227623 130/571 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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