DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment siz and EDA10

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_171698.1 Gene:EDA10 / 839301 AraportID:AT1G01960 Length:1750 Species:Arabidopsis thaliana


Alignment Length:670 Identity:161/670 - (24%)
Similarity:277/670 - (41%) Gaps:186/670 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   617 NGLCKTAEN---GSLTSVQSSGSDSSVTSAERNLNSDLGSD--------RSNSPHTWKRGTALNS 670
            |||.|||:.   |::|::......:....|.:.|.:.|.|.        |...|::.|....::.
plant   498 NGLLKTAQGVPPGTVTTLLPPQEAAMKLEAMKCLVAVLRSMGDWVNKQLRLPDPYSAKMLEIVDR 562

  Fly   671 SQQFSTHSADSAGAVSGGGVGVAGGAGVYAAQMQAAVAAATAAGGMPPADDHAISSHTSAAQYEQ 735
            :.:..:|..::       |.|..|..|...:..|:.::                |.::.|...||
plant   563 NLEEGSHPVEN-------GKGDGGHGGFERSDSQSELS----------------SGNSDALAIEQ 604

  Fly   736 HEQQQHEQQQLQAAAAAAGVAQNYKMSETIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQG 800
            ....:.|.|:                           |:::||:||:|||.:||:...:.::|:.
plant   605 RRAYKLELQE---------------------------GISIFNQKPKKGIEFLIKANKVGDSPEE 642

  Fly   801 VARFLITRKGLSRQMIGEYLGNLQNQFNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQK 865
            :|.||....||::.:||:|||. :...::.|:..:....:..|.:.|.|:|.|...||:||||||
plant   643 IAAFLKDASGLNKTLIGDYLGE-REDLSLKVMHAYVDSFEFQGMEFDEAIRAFLRGFRLPGEAQK 706

  Fly   866 IERLMEIFSQRYCECNADIVGRLRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRG 930
            |:|:||.|::|:|:||..   ...|:||.:|||:::|:||||.|.|.:|  .:|..:.||:|.||
plant   707 IDRIMEKFAERFCKCNPK---DFSSADTAYVLAYSVILLNTDAHNPMVK--SKMTADGFIRNNRG 766

  Fly   931 IDDCHDIDKDMLMGIYDRVKSDEFKPGSDHVTQVMKVQAT----IVGKKP--NLALPHRRLVCYC 989
            |||..|:.::.|..:|:|:..:|.|...|.:....| |.|    ::|...  |:.:|.|.     
plant   767 IDDGKDLPEEYLRALYERISRNEIKMKDDGLGPQQK-QPTNSSRLLGLDTILNIVVPRRG----- 825

  Fly   990 RLYEIPDVNKKERPGV--HQREVFLFNDLLVITKIFSKKKTSVTYTFRN---------------- 1036
                 .|:|.:....:  |.:|.|         |..::|..||.|...:                
plant   826 -----DDMNMETSDDLIRHMQERF---------KEKARKSESVYYAASDVIILRFMVEVCWAPML 876

  Fly  1037 ---SFPL---CGTVVTLLDMPNYPFCIQ----LSQKVDGKILITFNARNEHDRCKFAE-----DL 1086
               |.||   ...|:|.|.:..:...|.    :|.|......:|..|       ||..     |:
plant   877 AAFSVPLDQSDDAVITTLCLEGFHHAIHVTSVMSLKTHRDAFVTSLA-------KFTSLHSPADI 934

  Fly  1087 KE-------SISEMDEMESLRIEAELERQKSARNR----------APGNA--------ENRDSGV 1126
            |:       :|.::.|.|...::...|...:..:|          ||.:|        |:.:|.:
plant   935 KQKNIEAIKAIVKLAEEEGNYLQDAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQTESGNSPL 999

  Fly  1127 ADVEVCPCPYQQ------------------GSQASGEQAPNSADNSQQLKRSALSNSLLDMHEQF 1173
            |.....|...::                  ||..:| :|.|:..:.|.  .:.:||  |::.||.
plant  1000 AKPNSVPAIKERAPGKLQYAASAMIRGSYDGSGVAG-KASNTVTSEQM--NNLISN--LNLLEQV 1059

  Fly  1174 GN-----EKPQRRGSVGSLD 1188
            |:     .:.||..|...:|
plant  1060 GDMSRIFTRSQRLNSEAIID 1079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178 71/187 (38%)
PH_IQSEC 981..1108 CDD:270128 31/166 (19%)
EDA10NP_171698.1 PLN03076 1..1749 CDD:215560 161/670 (24%)

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