DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and GNL1

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_198766.1 Gene:GNL1 / 833946 AraportID:AT5G39500 Length:1443 Species:Arabidopsis thaliana


Alignment Length:29 Identity:10/29 - (34%)
Similarity:11/29 - (37%) Gaps:16/29 - (55%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 ELDYD----GKRDRWNGYDP-----STYH 154
            |||:|    .|       ||     |.||
plant    69 ELDFDHLVFSK-------DPTETASSVYH 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178
PH_IQSEC 981..1108 CDD:270128
GNL1NP_198766.1 PLN03076 <352..>1295 CDD:215560
Blue background indicates that the domain is not in the aligned region.

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