DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and AT4G35380

DIOPT Version :9

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_195264.2 Gene:AT4G35380 / 829691 AraportID:AT4G35380 Length:1706 Species:Arabidopsis thaliana


Alignment Length:523 Identity:135/523 - (25%)
Similarity:219/523 - (41%) Gaps:122/523 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   595 QQQTQLLLLQRQTPPPPSLLR------------------TNGLCKTA---ENGSLTSVQSSGSDS 638
            |:.|.|.||.:.:..|..::.                  .|||.|||   ..||.|:: |...||
plant   417 QKMTVLNLLDKMSQDPQLMVDIFVNYDCDVESSNILERIVNGLLKTALGPPTGSSTTL-SPAQDS 480

  Fly   639 SVTSAERNLNSDLGSDRSN--------SPHTWKRGTALNSSQQFSTHSADSAGAVSGGGVGVAGG 695
            :..:.......:|.....|        :...|.:|:.                            
plant   481 TFRNDSVKCLVNLAKAMGNWMDQQLKVNETVWPKGSQ---------------------------- 517

  Fly   696 AGVYAAQMQAAVAAATAAGGMPPADDHAISSHTSAAQYEQHEQQQHEQQQLQAAAAAAGVAQNYK 760
              |||:....|...:...|.:...|....:|:..|......||::..:.:||.            
plant   518 --VYASMDSNASQISELEGTISDCDSQPDTSNPEAYDASMLEQRRAYKIELQK------------ 568

  Fly   761 MSETIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQGVARFLITRKGLSRQMIGEYLGNLQN 825
                        |::|||:||.||:.:||....:.::|:.||.||:...||:..:||:|||. ::
plant   569 ------------GISLFNRKPSKGVEFLISTKKIGSSPEEVASFLMKTAGLNGTVIGDYLGE-RD 620

  Fly   826 QFNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRS 890
            :..:.|:..:....:...:....|:|.|...||:|||||||:|:||.|::.|.:||.   |...|
plant   621 ELPLKVMHAYVDSFNFEKKDFVEAIRFFLRGFRLPGEAQKIDRIMEKFAEHYWKCNP---GSFTS 682

  Fly   891 SDTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGIDDCHDIDKDMLMGIYDRVKSDEFK 955
            :||.:|||:::||||||.|...:|.  :|...||::|.|||||..|:.::.|..:||||..:|.:
plant   683 ADTAYVLAYSVIMLNTDAHNNMVKD--KMTKADFVRNNRGIDDGKDLPEEYLGSLYDRVVKEEIR 745

  Fly   956 PGSDHVTQVMKVQATIVGKKPNLALPH-RRLVCYCRLYEIPDVNKKERP-GVHQREVFLFNDLLV 1018
            ..||.:....|   .:.|....|.|.. ..||.:.:    ||    |:| |.:.|   |..|:..
plant   746 MNSDTLAPQNK---QVNGLNKLLGLDGILNLVSWMQ----PD----EKPHGANGR---LIRDIQE 796

  Fly  1019 ITKIFSKKKTSVTYTFRNSFPLCGTVVTLLDMPNYPFCIQLSQKVDGKILITFNARNEHDRCKFA 1083
            ..:...:|..||.:             |:.|:....|.:::|.   |.:|..|:...:....:.|
plant   797 QFQAKPEKSESVYH-------------TVTDISILRFILEVSW---GPMLAAFSVTIDQSDDRLA 845

  Fly  1084 EDL 1086
            ..|
plant   846 TSL 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:279680 72/187 (39%)
PH_IQSEC 981..1108 CDD:270128 22/108 (20%)
AT4G35380NP_195264.2 PLN03076 11..1705 CDD:215560 135/523 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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