DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and AT3G60860

DIOPT Version :9

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_191645.1 Gene:AT3G60860 / 825257 AraportID:AT3G60860 Length:1793 Species:Arabidopsis thaliana


Alignment Length:728 Identity:168/728 - (23%)
Similarity:276/728 - (37%) Gaps:207/728 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   617 NGLCKTAEN---GSLTSVQSSGSDSSVTSAERNLNSDLGS--DRSNSPHTWKRGTALNSSQ---- 672
            |||.|||:.   |:.|::......:....|.:.|.:.|.|  |..|.........:||.|.    
plant   510 NGLLKTAQGVPPGTATTLMPPQEAAMKLEAMKCLVAILKSMGDWLNKQLRLPVSNSLNKSDVIEI 574

  Fly   673 -------QFSTHSADSAGAVSGGGVGVAGGAGVYAAQMQAAVAAATAAGGMPPADDHAISSHTSA 730
                   |.:..:||.:          |.|:..|          :.::||.           :.|
plant   575 DLGPGSPQLANGNADES----------ADGSDTY----------SESSGGT-----------SDA 608

  Fly   731 AQYEQHEQQQHEQQQLQAAAAAAGVAQNYKMSETIRKRQYRVGLNLFNKKPEKGITYLIRRGFLE 795
            ...||....:.|.|:                           |::|||:||.|||.:||..|.:.
plant   609 LAIEQRRAYKLELQE---------------------------GISLFNRKPTKGIEFLINAGKVG 646

  Fly   796 NTPQGVARFLITRKGLSRQMIGEYLGNLQNQFNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMP 860
            .:|:.:|.||....||::.:||:|||. :....:.|:..:....|..|.:.|.|:|.|...||:|
plant   647 ESPEEIAGFLKDASGLNKTLIGDYLGE-REDLALKVMHAYVDSFDFRGMEFDEAIRTFLEGFRLP 710

  Fly   861 GEAQKIERLMEIFSQRYCECNADIVGRLRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFI 925
            ||||||:|:||.|::|||:||..:   ..|:|:.:|||:::||||||.|.|.:|  .:|..:|||
plant   711 GEAQKIDRIMEKFAERYCKCNPKV---FTSADSAYVLAYSVIMLNTDAHNPMVK--NKMSADDFI 770

  Fly   926 KNLRGIDDCHDIDKDMLMGIYDRVKSDEFKPGSDHVTQVMKVQAT---IVGKKPNLALPHRR--- 984
            :|.|||||..|:..|.:..:|:|:...|.|...|.:....|..|.   ::|....|.:..|:   
plant   771 RNNRGIDDGKDLPADYMRSLYERITKHEIKMKEDDLRLQQKQYANSNRMLGLDGILNIVIRKQWG 835

  Fly   985 ---------LVCYCRLYEIPDVNKKERPGVHQREVFLF----------------------NDLLV 1018
                     |:.:.:........|.|.......:|.:.                      :||:|
plant   836 DSYAETSDDLMKHMQEQFKEKARKSESTYYAATDVVILRFMIEACWAPMLAAFSVPLDQSDDLIV 900

  Fly  1019 I-------------TKIFSKKKTSVTYTFRNSFPLCGTVVTLLDMPNYPFCIQLSQKVDGKILIT 1070
            |             |.:.|.|      |.|::|.......|.|..|     ..:.|:....|...
plant   901 INICLEGFHHAIHATSLMSMK------THRDAFVTSLAKFTSLHSP-----ADIKQRNIEAIKAI 954

  Fly  1071 FNARNEHDRCKFAEDLKESI----SEMDEME--------------SLRIEAELERQKS------A 1111
            ....:|..  .:.:|..|.|    |..:::.              |.:.|:|..:|..      .
plant   955 LRLADEEG--NYLQDAWEHILTCVSRFEQLHLLGEGAPPDATFFASKQNESEKSKQPKQYILPVL 1017

  Fly  1112 RNRAPGNAENRDSGVADVEVCPCPYQQGSQASGEQAPNSADNSQQLKRSALSNSLLDMHEQFGNE 1176
            :.:.||.::...:||.          :||..|.......:.|.:|.:.|::.:: |::.||.|. 
plant  1018 KRKGPGKSQYAATGVL----------RGSYDSMSLGGKGSKNVRQEQMSSIVSN-LNLLEQVGE- 1070

  Fly  1177 KPQRRGSVGSLDSGMSISFQSTTTSSASRENAAAIAAAANAAAAAKMRFNMPPTAAIATPSN--V 1239
                               .:...|.:.:.|:.||.....|.....|       ..:.:|||  |
plant  1071 -------------------MNQVFSQSQKLNSEAIIDFVKALCKVSM-------DELRSPSNPRV 1109

  Fly  1240 YAAPGMQAYTHAN 1252
            ::...:....|.|
plant  1110 FSLTKIVEIAHYN 1122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:279680 76/187 (41%)
PH_IQSEC 981..1108 CDD:270128 28/191 (15%)
AT3G60860NP_191645.1 PLN03076 1..1793 CDD:215560 168/728 (23%)
DCB 6..217 CDD:292830
Sec7_N 345..499 CDD:289549
Sec7 617..799 CDD:279680 78/214 (36%)
DUF1981 1166..1249 CDD:286414
Mon2_C 1346..>1421 CDD:292823
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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